This pipeline computes the correlation between significant copy number variation (cnv focal) genes and molecular subtypes.
Testing the association between copy number variation 62 focal events and 8 molecular subtypes across 370 patients, 288 significant findings detected with P value < 0.05 and Q value < 0.25.
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amp_1p22.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_1q22 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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amp_1q42.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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amp_2p24.1 cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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amp_2q33.1 cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_3q26.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_4p14 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_5p15.33 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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amp_5q35.3 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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amp_6p25.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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amp_6p21.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CNMF'.
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amp_6q12 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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amp_6q12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_7q31.2 cnv correlated to 'METHLYATION_CNMF'.
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amp_8q13.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_8q24.21 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_9q34.2 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_11q13.3 cnv correlated to 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_13q32.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_13q33.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_15q26.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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amp_17p11.2 cnv correlated to 'METHLYATION_CNMF' and 'MIRSEQ_CNMF'.
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amp_17q25.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_19p13.12 cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_19q12 cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_19q13.11 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_20q13.13 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_20q13.33 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_xq28 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_1p36.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_1p36.11 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_2q22.1 cnv correlated to 'MRNASEQ_CNMF'.
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del_2q37.3 cnv correlated to 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_3p13 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4p16.3 cnv correlated to 'CN_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4q21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4q22.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4q35.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_6q27 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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del_8p23.2 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_8p12 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_9p21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_9q31.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_10q23.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_10q26.13 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_11q14.1 cnv correlated to 'CN_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_11q24.2 cnv correlated to 'CN_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_12p12.1 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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del_12q24.33 cnv correlated to 'CN_CNMF'.
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del_13q14.2 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_14q23.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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del_14q32.33 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_15q26.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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del_16q23.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_17p13.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_17p11.2 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_18q21.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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del_19p13.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_20p12.1 cnv correlated to 'CN_CNMF'.
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del_22q12.1 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CNMF'.
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del_22q13.32 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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del_xq26.2 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
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nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
amp 17q25 3 | 145 (39%) | 225 |
3e-05 (0.000216) |
0.021 (0.0431) |
0.00106 (0.00392) |
0.0104 (0.0242) |
0.00103 (0.00384) |
0.0014 (0.00489) |
0.0255 (0.0508) |
0.015 (0.0324) |
amp xq28 | 85 (23%) | 285 |
9e-05 (0.000519) |
0.0294 (0.0574) |
0.0409 (0.0732) |
0.0161 (0.0342) |
0.00924 (0.0221) |
0.00492 (0.0133) |
0.0473 (0.0823) |
0.00034 (0.00148) |
del 1p36 11 | 142 (38%) | 228 |
4e-05 (0.000268) |
1e-05 (9.54e-05) |
1e-05 (9.54e-05) |
1e-05 (9.54e-05) |
0.00167 (0.00559) |
5e-05 (0.000314) |
0.00023 (0.00113) |
0.00037 (0.00157) |
del 3p13 | 73 (20%) | 297 |
0.0054 (0.0145) |
0.0458 (0.0803) |
7e-05 (0.000418) |
1e-05 (9.54e-05) |
0.00167 (0.00559) |
0.0339 (0.0635) |
0.00028 (0.00131) |
0.00202 (0.00638) |
del 10q23 31 | 97 (26%) | 273 |
0.0306 (0.0583) |
0.0139 (0.0306) |
1e-05 (9.54e-05) |
1e-05 (9.54e-05) |
0.0312 (0.0592) |
1e-05 (9.54e-05) |
0.0481 (0.0832) |
1e-05 (9.54e-05) |
amp 3q26 31 | 77 (21%) | 293 |
0.0003 (0.00133) |
0.0318 (0.06) |
0.00671 (0.0176) |
0.0196 (0.0407) |
0.0757 (0.119) |
0.0045 (0.0124) |
0.0402 (0.0725) |
0.0227 (0.046) |
amp 8q24 21 | 231 (62%) | 139 |
1e-05 (9.54e-05) |
0.00752 (0.0191) |
2e-05 (0.00015) |
1e-05 (9.54e-05) |
0.0153 (0.033) |
0.00718 (0.0185) |
0.0821 (0.127) |
2e-05 (0.00015) |
amp 19p13 12 | 69 (19%) | 301 |
0.081 (0.126) |
0.00017 (0.000888) |
8e-05 (0.000467) |
0.00054 (0.00216) |
4e-05 (0.000268) |
0.00246 (0.00753) |
0.0006 (0.00238) |
0.00129 (0.0046) |
amp 19q12 | 78 (21%) | 292 |
0.0549 (0.0924) |
0.00239 (0.00736) |
0.00154 (0.00523) |
0.00138 (0.00485) |
0.00111 (0.00408) |
0.0111 (0.0256) |
0.00027 (0.00129) |
0.002 (0.00636) |
amp 19q13 11 | 91 (25%) | 279 |
0.0299 (0.0578) |
0.0733 (0.116) |
0.00099 (0.00372) |
0.00062 (0.00244) |
0.00701 (0.0182) |
0.00178 (0.00577) |
3e-05 (0.000216) |
0.00046 (0.00189) |
del 1p36 31 | 162 (44%) | 208 |
0.00149 (0.00513) |
1e-05 (9.54e-05) |
1e-05 (9.54e-05) |
2e-05 (0.00015) |
0.0545 (0.0919) |
0.00127 (0.00456) |
0.0127 (0.0284) |
0.00971 (0.023) |
del 4q21 3 | 171 (46%) | 199 |
1e-05 (9.54e-05) |
0.00281 (0.00835) |
1e-05 (9.54e-05) |
0.0003 (0.00133) |
0.189 (0.249) |
0.00174 (0.00568) |
2e-05 (0.00015) |
0.00041 (0.00169) |
del 4q22 3 | 172 (46%) | 198 |
1e-05 (9.54e-05) |
0.00341 (0.00989) |
1e-05 (9.54e-05) |
0.00022 (0.0011) |
0.209 (0.265) |
0.00121 (0.00438) |
0.00011 (6e-04) |
0.00052 (0.0021) |
del 4q35 1 | 172 (46%) | 198 |
1e-05 (9.54e-05) |
0.00028 (0.00131) |
1e-05 (9.54e-05) |
0.00067 (0.00262) |
0.153 (0.212) |
0.00595 (0.0159) |
0.0003 (0.00133) |
0.00453 (0.0124) |
del 9p21 3 | 150 (41%) | 220 |
3e-05 (0.000216) |
0.00787 (0.0198) |
2e-05 (0.00015) |
0.00199 (0.00636) |
0.265 (0.322) |
0.00206 (0.00647) |
0.0192 (0.04) |
0.00773 (0.0196) |
del 16q23 1 | 162 (44%) | 208 |
1e-05 (9.54e-05) |
1e-05 (9.54e-05) |
1e-05 (9.54e-05) |
1e-05 (9.54e-05) |
0.712 (0.748) |
1e-05 (9.54e-05) |
2e-05 (0.00015) |
4e-05 (0.000268) |
del 17p13 1 | 226 (61%) | 144 |
1e-05 (9.54e-05) |
0.0214 (0.0436) |
2e-05 (0.00015) |
0.0001 (0.000564) |
0.00172 (0.00568) |
5e-05 (0.000314) |
0.627 (0.677) |
1e-05 (9.54e-05) |
amp 4p14 | 54 (15%) | 316 |
0.00364 (0.0104) |
0.027 (0.0534) |
0.00011 (6e-04) |
0.00112 (0.00408) |
0.185 (0.245) |
0.0566 (0.0948) |
0.01 (0.0235) |
0.0159 (0.0341) |
amp 8q13 3 | 207 (56%) | 163 |
1e-05 (9.54e-05) |
0.148 (0.207) |
6e-05 (0.000367) |
1e-05 (9.54e-05) |
0.0991 (0.149) |
0.00219 (0.00679) |
0.0394 (0.0718) |
2e-05 (0.00015) |
del 9q31 3 | 119 (32%) | 251 |
0.00199 (0.00636) |
0.0142 (0.0311) |
0.00284 (0.00838) |
0.00032 (0.0014) |
0.157 (0.216) |
0.00661 (0.0175) |
0.0652 (0.106) |
0.0002 (0.00102) |
del 10q26 13 | 105 (28%) | 265 |
0.00831 (0.0205) |
0.048 (0.0832) |
1e-05 (9.54e-05) |
1e-05 (9.54e-05) |
0.135 (0.193) |
2e-05 (0.00015) |
0.203 (0.261) |
1e-05 (9.54e-05) |
del 13q14 2 | 179 (48%) | 191 |
1e-05 (9.54e-05) |
0.0773 (0.121) |
0.00029 (0.00132) |
1e-05 (9.54e-05) |
0.00271 (0.00815) |
0.00071 (0.00275) |
0.0989 (0.149) |
8e-05 (0.000467) |
del 17p11 2 | 195 (53%) | 175 |
1e-05 (9.54e-05) |
0.153 (0.212) |
0.00145 (0.00503) |
0.00828 (0.0205) |
0.0001 (0.000564) |
0.00029 (0.00132) |
0.275 (0.334) |
0.00022 (0.0011) |
amp 1q22 | 283 (76%) | 87 |
1e-05 (9.54e-05) |
1e-05 (9.54e-05) |
5e-05 (0.000314) |
0.0035 (0.01) |
0.829 (0.857) |
0.0124 (0.028) |
0.209 (0.265) |
0.304 (0.362) |
amp 1q42 3 | 270 (73%) | 100 |
1e-05 (9.54e-05) |
0.00012 (0.00064) |
2e-05 (0.00015) |
0.0009 (0.00341) |
0.495 (0.556) |
0.0375 (0.0689) |
0.387 (0.448) |
0.557 (0.611) |
amp 6q12 | 83 (22%) | 287 |
2e-05 (0.00015) |
0.00722 (0.0185) |
0.00811 (0.0202) |
0.00931 (0.0222) |
0.881 (0.901) |
0.551 (0.606) |
0.00423 (0.0119) |
0.07 (0.113) |
amp 11q13 3 | 57 (15%) | 313 |
0.308 (0.366) |
0.616 (0.668) |
0.0079 (0.0198) |
0.0175 (0.0369) |
0.00853 (0.0208) |
0.00334 (0.00974) |
0.215 (0.272) |
0.00018 (0.00093) |
amp 20q13 13 | 124 (34%) | 246 |
1e-05 (9.54e-05) |
0.365 (0.427) |
0.0311 (0.0591) |
0.00039 (0.00164) |
0.109 (0.161) |
0.0118 (0.0268) |
1e-05 (9.54e-05) |
0.0609 (0.101) |
del 2q37 3 | 62 (17%) | 308 |
0.104 (0.156) |
0.706 (0.743) |
4e-05 (0.000268) |
0.00081 (0.00309) |
0.04 (0.0725) |
0.0098 (0.0231) |
0.236 (0.295) |
0.00151 (0.00517) |
del 14q32 33 | 132 (36%) | 238 |
1e-05 (9.54e-05) |
0.114 (0.168) |
0.00024 (0.00117) |
7e-05 (0.000418) |
0.753 (0.784) |
0.243 (0.303) |
0.0147 (0.032) |
0.0304 (0.0581) |
del 19p13 3 | 87 (24%) | 283 |
1e-05 (9.54e-05) |
0.428 (0.486) |
0.00027 (0.00129) |
0.00295 (0.00866) |
0.405 (0.463) |
0.131 (0.187) |
0.0212 (0.0433) |
0.00251 (0.00764) |
amp 1p22 3 | 89 (24%) | 281 |
1e-05 (9.54e-05) |
0.00279 (0.00834) |
0.0534 (0.0909) |
0.0458 (0.0803) |
0.522 (0.579) |
0.945 (0.953) |
0.00899 (0.0216) |
0.149 (0.208) |
amp 6p25 2 | 159 (43%) | 211 |
1e-05 (9.54e-05) |
0.00015 (0.000791) |
0.0177 (0.0372) |
0.0245 (0.0492) |
0.667 (0.711) |
0.0625 (0.103) |
0.209 (0.265) |
0.4 (0.46) |
amp 9q34 2 | 47 (13%) | 323 |
0.03 (0.0578) |
0.168 (0.227) |
0.0334 (0.0628) |
0.0925 (0.142) |
0.0591 (0.098) |
0.0134 (0.0295) |
0.329 (0.389) |
0.0128 (0.0284) |
amp 13q32 3 | 67 (18%) | 303 |
1e-05 (9.54e-05) |
0.0537 (0.0909) |
0.016 (0.0342) |
0.0801 (0.125) |
0.166 (0.225) |
0.2 (0.258) |
0.0129 (0.0285) |
0.0183 (0.0382) |
amp 13q33 3 | 67 (18%) | 303 |
1e-05 (9.54e-05) |
0.0199 (0.0411) |
0.00436 (0.0121) |
0.25 (0.308) |
0.154 (0.213) |
0.179 (0.239) |
0.0714 (0.114) |
0.0491 (0.0845) |
amp 20q13 33 | 128 (35%) | 242 |
1e-05 (9.54e-05) |
0.0717 (0.114) |
0.00713 (0.0184) |
6e-05 (0.000367) |
0.191 (0.25) |
0.061 (0.101) |
2e-05 (0.00015) |
0.125 (0.179) |
del 4p16 3 | 85 (23%) | 285 |
2e-05 (0.00015) |
0.105 (0.157) |
0.198 (0.257) |
0.102 (0.153) |
0.704 (0.743) |
0.0273 (0.0536) |
0.0453 (0.08) |
0.0068 (0.0178) |
del 14q23 3 | 131 (35%) | 239 |
1e-05 (9.54e-05) |
0.374 (0.436) |
0.00012 (0.00064) |
4e-05 (0.000268) |
0.875 (0.897) |
0.0975 (0.148) |
0.00665 (0.0175) |
0.0585 (0.0974) |
del 15q26 3 | 79 (21%) | 291 |
0.0349 (0.0648) |
0.25 (0.308) |
0.0045 (0.0124) |
0.00839 (0.0206) |
0.356 (0.417) |
0.121 (0.175) |
0.00173 (0.00568) |
0.0708 (0.114) |
amp 2p24 1 | 65 (18%) | 305 |
0.00475 (0.0129) |
0.54 (0.597) |
0.144 (0.204) |
0.00403 (0.0114) |
0.481 (0.542) |
0.043 (0.0768) |
0.141 (0.2) |
0.0923 (0.142) |
amp 2q33 1 | 64 (17%) | 306 |
0.00344 (0.00992) |
0.583 (0.636) |
0.0522 (0.0892) |
0.0112 (0.0256) |
0.281 (0.338) |
0.121 (0.175) |
0.00023 (0.00113) |
0.173 (0.232) |
amp 5p15 33 | 163 (44%) | 207 |
1e-05 (9.54e-05) |
0.0374 (0.0689) |
0.221 (0.278) |
0.607 (0.66) |
0.0756 (0.119) |
0.0172 (0.0364) |
0.0919 (0.142) |
0.165 (0.225) |
amp 6p21 1 | 158 (43%) | 212 |
1e-05 (9.54e-05) |
0.00035 (0.00151) |
0.0112 (0.0256) |
0.0645 (0.105) |
0.117 (0.17) |
0.0643 (0.105) |
0.277 (0.335) |
0.5 (0.561) |
amp 6q12 | 109 (29%) | 261 |
1e-05 (9.54e-05) |
0.0536 (0.0909) |
0.0367 (0.0679) |
0.107 (0.159) |
0.458 (0.519) |
0.619 (0.671) |
0.00993 (0.0233) |
0.153 (0.212) |
amp 15q26 3 | 54 (15%) | 316 |
0.0258 (0.0512) |
0.2 (0.258) |
0.0405 (0.0729) |
0.0389 (0.0712) |
0.838 (0.864) |
0.181 (0.24) |
0.299 (0.358) |
0.419 (0.479) |
del 6q27 | 136 (37%) | 234 |
0.00878 (0.0212) |
0.0272 (0.0535) |
0.685 (0.728) |
0.481 (0.542) |
0.647 (0.695) |
0.0397 (0.0721) |
0.353 (0.415) |
0.159 (0.218) |
del 11q14 1 | 77 (21%) | 293 |
0.0115 (0.0263) |
0.652 (0.697) |
0.11 (0.162) |
0.144 (0.204) |
0.802 (0.834) |
0.261 (0.319) |
0.00037 (0.00157) |
0.0125 (0.0282) |
del 11q24 2 | 95 (26%) | 275 |
0.00428 (0.012) |
0.296 (0.355) |
0.124 (0.178) |
0.0511 (0.0878) |
0.318 (0.377) |
0.257 (0.314) |
0.00077 (0.00296) |
0.0004 (0.00167) |
del 12p12 1 | 78 (21%) | 292 |
0.00047 (0.00191) |
0.161 (0.22) |
0.00211 (0.00658) |
0.227 (0.286) |
0.216 (0.273) |
0.0301 (0.0578) |
0.506 (0.565) |
0.0716 (0.114) |
del 18q21 2 | 94 (25%) | 276 |
0.00138 (0.00485) |
0.00029 (0.00132) |
0.205 (0.263) |
1e-05 (9.54e-05) |
0.115 (0.168) |
0.539 (0.596) |
0.172 (0.231) |
0.248 (0.308) |
del 22q13 32 | 83 (22%) | 287 |
0.0049 (0.0133) |
0.0581 (0.0971) |
5e-05 (0.000314) |
0.0104 (0.0242) |
0.093 (0.142) |
0.263 (0.321) |
0.181 (0.24) |
0.122 (0.175) |
amp 5q35 3 | 135 (36%) | 235 |
5e-05 (0.000314) |
0.0347 (0.0646) |
0.574 (0.627) |
0.959 (0.962) |
0.937 (0.947) |
0.999 (0.999) |
0.852 (0.875) |
0.635 (0.684) |
amp 17p11 2 | 46 (12%) | 324 |
0.2 (0.258) |
0.0209 (0.043) |
0.391 (0.451) |
0.231 (0.288) |
0.0253 (0.0507) |
0.252 (0.309) |
0.0796 (0.125) |
0.0872 (0.135) |
del 8p23 2 | 247 (67%) | 123 |
1e-05 (9.54e-05) |
0.0443 (0.0785) |
0.157 (0.216) |
0.649 (0.695) |
0.249 (0.308) |
0.167 (0.227) |
0.334 (0.394) |
0.145 (0.204) |
del 8p12 | 242 (65%) | 128 |
1e-05 (9.54e-05) |
0.0239 (0.0482) |
0.145 (0.204) |
0.562 (0.615) |
0.191 (0.25) |
0.101 (0.152) |
0.278 (0.336) |
0.0964 (0.147) |
del 22q12 1 | 79 (21%) | 291 |
0.0296 (0.0576) |
0.189 (0.249) |
0.00168 (0.00559) |
0.105 (0.157) |
0.229 (0.287) |
0.196 (0.255) |
0.181 (0.24) |
0.503 (0.563) |
del xq26 2 | 67 (18%) | 303 |
2e-05 (0.00015) |
0.0469 (0.0819) |
0.341 (0.401) |
0.392 (0.452) |
0.905 (0.92) |
0.697 (0.737) |
0.313 (0.372) |
0.894 (0.912) |
amp 7q31 2 | 120 (32%) | 250 |
0.196 (0.256) |
0.00875 (0.0212) |
0.98 (0.982) |
0.896 (0.912) |
0.522 (0.579) |
0.434 (0.493) |
0.697 (0.737) |
0.422 (0.481) |
del 2q22 1 | 52 (14%) | 318 |
0.0689 (0.111) |
0.509 (0.567) |
0.00254 (0.00768) |
0.0651 (0.106) |
0.208 (0.265) |
0.169 (0.227) |
0.636 (0.684) |
0.116 (0.169) |
del 12q24 33 | 59 (16%) | 311 |
0.00011 (6e-04) |
0.841 (0.865) |
0.748 (0.781) |
0.914 (0.928) |
0.815 (0.846) |
0.715 (0.75) |
0.819 (0.849) |
0.291 (0.349) |
del 20p12 1 | 29 (8%) | 341 |
0.0437 (0.0777) |
0.684 (0.728) |
0.954 (0.96) |
0.547 (0.602) |
0.377 (0.438) |
0.735 (0.77) |
0.923 (0.934) |
0.378 (0.438) |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 1(1P22.3) MUTATED | 22 | 49 | 18 |
AMP PEAK 1(1P22.3) WILD-TYPE | 87 | 75 | 119 |
P value = 0.00279 (Fisher's exact test), Q value = 0.0083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 1(1P22.3) MUTATED | 11 | 40 | 38 |
AMP PEAK 1(1P22.3) WILD-TYPE | 77 | 127 | 77 |
P value = 0.0458 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 1(1P22.3) MUTATED | 16 | 8 | 27 | 28 | 9 |
AMP PEAK 1(1P22.3) WILD-TYPE | 38 | 48 | 87 | 56 | 47 |
P value = 0.00899 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 1(1P22.3) MUTATED | 32 | 18 | 19 | 13 |
AMP PEAK 1(1P22.3) WILD-TYPE | 60 | 69 | 100 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 2(1Q22) MUTATED | 93 | 111 | 79 |
AMP PEAK 2(1Q22) WILD-TYPE | 16 | 13 | 58 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 2(1Q22) MUTATED | 47 | 135 | 101 |
AMP PEAK 2(1Q22) WILD-TYPE | 41 | 32 | 14 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 2(1Q22) MUTATED | 45 | 65 | 64 | 46 | 58 |
AMP PEAK 2(1Q22) WILD-TYPE | 16 | 32 | 4 | 23 | 11 |
P value = 0.0035 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 2(1Q22) MUTATED | 36 | 39 | 81 | 73 | 49 |
AMP PEAK 2(1Q22) WILD-TYPE | 18 | 17 | 33 | 11 | 7 |
P value = 0.0124 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 2(1Q22) MUTATED | 39 | 65 | 47 | 87 | 41 |
AMP PEAK 2(1Q22) WILD-TYPE | 5 | 30 | 9 | 35 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 3(1Q42.3) MUTATED | 90 | 103 | 77 |
AMP PEAK 3(1Q42.3) WILD-TYPE | 19 | 21 | 60 |
P value = 0.00012 (Fisher's exact test), Q value = 0.00064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 3(1Q42.3) MUTATED | 48 | 130 | 92 |
AMP PEAK 3(1Q42.3) WILD-TYPE | 40 | 37 | 23 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 3(1Q42.3) MUTATED | 43 | 57 | 63 | 46 | 56 |
AMP PEAK 3(1Q42.3) WILD-TYPE | 18 | 40 | 5 | 23 | 13 |
P value = 9e-04 (Fisher's exact test), Q value = 0.0034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 3(1Q42.3) MUTATED | 34 | 39 | 73 | 72 | 47 |
AMP PEAK 3(1Q42.3) WILD-TYPE | 20 | 17 | 41 | 12 | 9 |
P value = 0.0375 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 3(1Q42.3) MUTATED | 32 | 61 | 44 | 87 | 42 |
AMP PEAK 3(1Q42.3) WILD-TYPE | 12 | 34 | 12 | 35 | 6 |
P value = 0.00475 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 4(2P24.1) MUTATED | 12 | 33 | 20 |
AMP PEAK 4(2P24.1) WILD-TYPE | 97 | 91 | 117 |
P value = 0.00403 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 4(2P24.1) MUTATED | 17 | 3 | 21 | 16 | 6 |
AMP PEAK 4(2P24.1) WILD-TYPE | 37 | 53 | 93 | 68 | 50 |
P value = 0.043 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 4(2P24.1) MUTATED | 14 | 20 | 9 | 16 | 5 |
AMP PEAK 4(2P24.1) WILD-TYPE | 30 | 75 | 47 | 106 | 43 |
P value = 0.00344 (Fisher's exact test), Q value = 0.0099
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 5(2Q33.1) MUTATED | 16 | 33 | 15 |
AMP PEAK 5(2Q33.1) WILD-TYPE | 93 | 91 | 122 |
P value = 0.0112 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 5(2Q33.1) MUTATED | 15 | 4 | 14 | 20 | 9 |
AMP PEAK 5(2Q33.1) WILD-TYPE | 39 | 52 | 100 | 64 | 47 |
P value = 0.00023 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 5(2Q33.1) MUTATED | 29 | 9 | 13 | 10 |
AMP PEAK 5(2Q33.1) WILD-TYPE | 63 | 78 | 106 | 32 |
P value = 3e-04 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 6(3Q26.31) MUTATED | 15 | 41 | 21 |
AMP PEAK 6(3Q26.31) WILD-TYPE | 94 | 83 | 116 |
P value = 0.0318 (Fisher's exact test), Q value = 0.06
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 6(3Q26.31) MUTATED | 13 | 45 | 19 |
AMP PEAK 6(3Q26.31) WILD-TYPE | 75 | 122 | 96 |
P value = 0.00671 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 6(3Q26.31) MUTATED | 22 | 25 | 11 | 10 | 9 |
AMP PEAK 6(3Q26.31) WILD-TYPE | 39 | 72 | 57 | 59 | 60 |
P value = 0.0196 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 6(3Q26.31) MUTATED | 17 | 5 | 30 | 16 | 9 |
AMP PEAK 6(3Q26.31) WILD-TYPE | 37 | 51 | 84 | 68 | 47 |
P value = 0.0045 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 6(3Q26.31) MUTATED | 17 | 24 | 9 | 22 | 4 |
AMP PEAK 6(3Q26.31) WILD-TYPE | 27 | 71 | 47 | 100 | 44 |
P value = 0.0402 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 6(3Q26.31) MUTATED | 21 | 12 | 23 | 15 |
AMP PEAK 6(3Q26.31) WILD-TYPE | 71 | 75 | 96 | 27 |
P value = 0.0227 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 6(3Q26.31) MUTATED | 13 | 22 | 18 | 13 | 5 |
AMP PEAK 6(3Q26.31) WILD-TYPE | 54 | 64 | 81 | 22 | 48 |
P value = 0.00364 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 7(4P14) MUTATED | 13 | 29 | 12 |
AMP PEAK 7(4P14) WILD-TYPE | 96 | 95 | 125 |
P value = 0.027 (Fisher's exact test), Q value = 0.053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 7(4P14) MUTATED | 12 | 17 | 25 |
AMP PEAK 7(4P14) WILD-TYPE | 76 | 150 | 90 |
P value = 0.00011 (Fisher's exact test), Q value = 6e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 7(4P14) MUTATED | 10 | 14 | 20 | 8 | 1 |
AMP PEAK 7(4P14) WILD-TYPE | 51 | 83 | 48 | 61 | 68 |
P value = 0.00112 (Fisher's exact test), Q value = 0.0041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 7(4P14) MUTATED | 10 | 8 | 13 | 21 | 1 |
AMP PEAK 7(4P14) WILD-TYPE | 44 | 48 | 101 | 63 | 55 |
P value = 0.01 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 7(4P14) MUTATED | 18 | 14 | 10 | 12 |
AMP PEAK 7(4P14) WILD-TYPE | 74 | 73 | 109 | 30 |
P value = 0.0159 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 7(4P14) MUTATED | 12 | 17 | 18 | 6 | 1 |
AMP PEAK 7(4P14) WILD-TYPE | 55 | 69 | 81 | 29 | 52 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 8(5P15.33) MUTATED | 54 | 72 | 37 |
AMP PEAK 8(5P15.33) WILD-TYPE | 55 | 52 | 100 |
P value = 0.0374 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 8(5P15.33) MUTATED | 29 | 83 | 51 |
AMP PEAK 8(5P15.33) WILD-TYPE | 59 | 84 | 64 |
P value = 0.0172 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 8(5P15.33) MUTATED | 26 | 47 | 28 | 43 | 16 |
AMP PEAK 8(5P15.33) WILD-TYPE | 18 | 48 | 28 | 79 | 32 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 9(5Q35.3) MUTATED | 56 | 46 | 33 |
AMP PEAK 9(5Q35.3) WILD-TYPE | 53 | 78 | 104 |
P value = 0.0347 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 9(5Q35.3) MUTATED | 22 | 66 | 47 |
AMP PEAK 9(5Q35.3) WILD-TYPE | 66 | 101 | 68 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 10(6P25.2) MUTATED | 50 | 79 | 30 |
AMP PEAK 10(6P25.2) WILD-TYPE | 59 | 45 | 107 |
P value = 0.00015 (Fisher's exact test), Q value = 0.00079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 10(6P25.2) MUTATED | 21 | 82 | 56 |
AMP PEAK 10(6P25.2) WILD-TYPE | 67 | 85 | 59 |
P value = 0.0177 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 10(6P25.2) MUTATED | 30 | 36 | 37 | 21 | 35 |
AMP PEAK 10(6P25.2) WILD-TYPE | 31 | 61 | 31 | 48 | 34 |
P value = 0.0245 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 10(6P25.2) MUTATED | 24 | 16 | 45 | 46 | 28 |
AMP PEAK 10(6P25.2) WILD-TYPE | 30 | 40 | 69 | 38 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 11(6P21.1) MUTATED | 47 | 73 | 38 |
AMP PEAK 11(6P21.1) WILD-TYPE | 62 | 51 | 99 |
P value = 0.00035 (Fisher's exact test), Q value = 0.0015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 11(6P21.1) MUTATED | 22 | 84 | 52 |
AMP PEAK 11(6P21.1) WILD-TYPE | 66 | 83 | 63 |
P value = 0.0112 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 11(6P21.1) MUTATED | 25 | 44 | 36 | 18 | 35 |
AMP PEAK 11(6P21.1) WILD-TYPE | 36 | 53 | 32 | 51 | 34 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 12(6Q12) MUTATED | 33 | 55 | 21 |
AMP PEAK 12(6Q12) WILD-TYPE | 76 | 69 | 116 |
P value = 0.0367 (Fisher's exact test), Q value = 0.068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 12(6Q12) MUTATED | 22 | 25 | 29 | 14 | 19 |
AMP PEAK 12(6Q12) WILD-TYPE | 39 | 72 | 39 | 55 | 50 |
P value = 0.00993 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 12(6Q12) MUTATED | 35 | 21 | 26 | 18 |
AMP PEAK 12(6Q12) WILD-TYPE | 57 | 66 | 93 | 24 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 13(6Q12) MUTATED | 25 | 45 | 13 |
AMP PEAK 13(6Q12) WILD-TYPE | 84 | 79 | 124 |
P value = 0.00722 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 13(6Q12) MUTATED | 10 | 40 | 33 |
AMP PEAK 13(6Q12) WILD-TYPE | 78 | 127 | 82 |
P value = 0.00811 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 13(6Q12) MUTATED | 16 | 14 | 26 | 13 | 14 |
AMP PEAK 13(6Q12) WILD-TYPE | 45 | 83 | 42 | 56 | 55 |
P value = 0.00931 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 13(6Q12) MUTATED | 15 | 10 | 17 | 30 | 11 |
AMP PEAK 13(6Q12) WILD-TYPE | 39 | 46 | 97 | 54 | 45 |
P value = 0.00423 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 13(6Q12) MUTATED | 27 | 17 | 17 | 16 |
AMP PEAK 13(6Q12) WILD-TYPE | 65 | 70 | 102 | 26 |
P value = 0.00875 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 14(7Q31.2) MUTATED | 22 | 68 | 30 |
AMP PEAK 14(7Q31.2) WILD-TYPE | 66 | 99 | 85 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 15(8Q13.3) MUTATED | 105 | 68 | 34 |
AMP PEAK 15(8Q13.3) WILD-TYPE | 4 | 56 | 103 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 15(8Q13.3) MUTATED | 40 | 33 | 45 | 40 | 44 |
AMP PEAK 15(8Q13.3) WILD-TYPE | 21 | 64 | 23 | 29 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 15(8Q13.3) MUTATED | 33 | 36 | 41 | 56 | 36 |
AMP PEAK 15(8Q13.3) WILD-TYPE | 21 | 20 | 73 | 28 | 20 |
P value = 0.00219 (Fisher's exact test), Q value = 0.0068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 15(8Q13.3) MUTATED | 23 | 37 | 34 | 77 | 32 |
AMP PEAK 15(8Q13.3) WILD-TYPE | 21 | 58 | 22 | 45 | 16 |
P value = 0.0394 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 15(8Q13.3) MUTATED | 59 | 50 | 57 | 29 |
AMP PEAK 15(8Q13.3) WILD-TYPE | 33 | 37 | 62 | 13 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 15(8Q13.3) MUTATED | 49 | 32 | 61 | 16 | 37 |
AMP PEAK 15(8Q13.3) WILD-TYPE | 18 | 54 | 38 | 19 | 16 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 16(8Q24.21) MUTATED | 105 | 80 | 46 |
AMP PEAK 16(8Q24.21) WILD-TYPE | 4 | 44 | 91 |
P value = 0.00752 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 16(8Q24.21) MUTATED | 51 | 95 | 85 |
AMP PEAK 16(8Q24.21) WILD-TYPE | 37 | 72 | 30 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 16(8Q24.21) MUTATED | 42 | 39 | 48 | 47 | 50 |
AMP PEAK 16(8Q24.21) WILD-TYPE | 19 | 58 | 20 | 22 | 19 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 16(8Q24.21) MUTATED | 39 | 40 | 45 | 61 | 41 |
AMP PEAK 16(8Q24.21) WILD-TYPE | 15 | 16 | 69 | 23 | 15 |
P value = 0.0153 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
AMP PEAK 16(8Q24.21) MUTATED | 29 | 83 | 31 | 84 |
AMP PEAK 16(8Q24.21) WILD-TYPE | 36 | 44 | 18 | 40 |
P value = 0.00718 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 16(8Q24.21) MUTATED | 24 | 46 | 37 | 85 | 35 |
AMP PEAK 16(8Q24.21) WILD-TYPE | 20 | 49 | 19 | 37 | 13 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 16(8Q24.21) MUTATED | 51 | 37 | 70 | 18 | 41 |
AMP PEAK 16(8Q24.21) WILD-TYPE | 16 | 49 | 29 | 17 | 12 |
P value = 0.03 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 17(9Q34.2) MUTATED | 11 | 24 | 12 |
AMP PEAK 17(9Q34.2) WILD-TYPE | 98 | 100 | 125 |
P value = 0.0334 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 17(9Q34.2) MUTATED | 10 | 16 | 12 | 5 | 3 |
AMP PEAK 17(9Q34.2) WILD-TYPE | 51 | 81 | 56 | 64 | 66 |
P value = 0.0134 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 17(9Q34.2) MUTATED | 11 | 15 | 9 | 10 | 2 |
AMP PEAK 17(9Q34.2) WILD-TYPE | 33 | 80 | 47 | 112 | 46 |
P value = 0.0128 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 17(9Q34.2) MUTATED | 11 | 18 | 8 | 6 | 2 |
AMP PEAK 17(9Q34.2) WILD-TYPE | 56 | 68 | 91 | 29 | 51 |
P value = 0.0079 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 18(11Q13.3) MUTATED | 15 | 20 | 10 | 6 | 4 |
AMP PEAK 18(11Q13.3) WILD-TYPE | 46 | 77 | 58 | 63 | 65 |
P value = 0.0175 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 18(11Q13.3) MUTATED | 10 | 7 | 25 | 11 | 2 |
AMP PEAK 18(11Q13.3) WILD-TYPE | 44 | 49 | 89 | 73 | 54 |
P value = 0.00853 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
AMP PEAK 18(11Q13.3) MUTATED | 18 | 12 | 10 | 17 |
AMP PEAK 18(11Q13.3) WILD-TYPE | 47 | 115 | 39 | 107 |
P value = 0.00334 (Fisher's exact test), Q value = 0.0097
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 18(11Q13.3) MUTATED | 11 | 23 | 5 | 16 | 2 |
AMP PEAK 18(11Q13.3) WILD-TYPE | 33 | 72 | 51 | 106 | 46 |
P value = 0.00018 (Fisher's exact test), Q value = 0.00093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 18(11Q13.3) MUTATED | 12 | 19 | 13 | 10 | 0 |
AMP PEAK 18(11Q13.3) WILD-TYPE | 55 | 67 | 86 | 25 | 53 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 19(13Q32.3) MUTATED | 11 | 47 | 9 |
AMP PEAK 19(13Q32.3) WILD-TYPE | 98 | 77 | 128 |
P value = 0.016 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 19(13Q32.3) MUTATED | 14 | 15 | 21 | 8 | 8 |
AMP PEAK 19(13Q32.3) WILD-TYPE | 47 | 82 | 47 | 61 | 61 |
P value = 0.0129 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 19(13Q32.3) MUTATED | 26 | 13 | 14 | 10 |
AMP PEAK 19(13Q32.3) WILD-TYPE | 66 | 74 | 105 | 32 |
P value = 0.0183 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 19(13Q32.3) MUTATED | 19 | 13 | 17 | 10 | 4 |
AMP PEAK 19(13Q32.3) WILD-TYPE | 48 | 73 | 82 | 25 | 49 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 20(13Q33.3) MUTATED | 14 | 44 | 9 |
AMP PEAK 20(13Q33.3) WILD-TYPE | 95 | 80 | 128 |
P value = 0.0199 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 20(13Q33.3) MUTATED | 9 | 29 | 29 |
AMP PEAK 20(13Q33.3) WILD-TYPE | 79 | 138 | 86 |
P value = 0.00436 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 20(13Q33.3) MUTATED | 13 | 12 | 23 | 8 | 10 |
AMP PEAK 20(13Q33.3) WILD-TYPE | 48 | 85 | 45 | 61 | 59 |
P value = 0.0491 (Fisher's exact test), Q value = 0.085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 20(13Q33.3) MUTATED | 18 | 12 | 18 | 10 | 5 |
AMP PEAK 20(13Q33.3) WILD-TYPE | 49 | 74 | 81 | 25 | 48 |
P value = 0.0258 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 21(15Q26.3) MUTATED | 12 | 27 | 15 |
AMP PEAK 21(15Q26.3) WILD-TYPE | 97 | 97 | 122 |
P value = 0.0405 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 21(15Q26.3) MUTATED | 8 | 16 | 17 | 7 | 5 |
AMP PEAK 21(15Q26.3) WILD-TYPE | 53 | 81 | 51 | 62 | 64 |
P value = 0.0389 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 21(15Q26.3) MUTATED | 9 | 7 | 17 | 18 | 2 |
AMP PEAK 21(15Q26.3) WILD-TYPE | 45 | 49 | 97 | 66 | 54 |
P value = 0.0209 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 22(17P11.2) MUTATED | 4 | 23 | 19 |
AMP PEAK 22(17P11.2) WILD-TYPE | 84 | 144 | 96 |
P value = 0.0253 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
AMP PEAK 22(17P11.2) MUTATED | 6 | 25 | 6 | 9 |
AMP PEAK 22(17P11.2) WILD-TYPE | 59 | 102 | 43 | 115 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 23(17Q25.3) MUTATED | 35 | 70 | 40 |
AMP PEAK 23(17Q25.3) WILD-TYPE | 74 | 54 | 97 |
P value = 0.021 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 23(17Q25.3) MUTATED | 25 | 77 | 43 |
AMP PEAK 23(17Q25.3) WILD-TYPE | 63 | 90 | 72 |
P value = 0.00106 (Fisher's exact test), Q value = 0.0039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 23(17Q25.3) MUTATED | 33 | 40 | 22 | 15 | 32 |
AMP PEAK 23(17Q25.3) WILD-TYPE | 28 | 57 | 46 | 54 | 37 |
P value = 0.0104 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 23(17Q25.3) MUTATED | 28 | 12 | 49 | 29 | 24 |
AMP PEAK 23(17Q25.3) WILD-TYPE | 26 | 44 | 65 | 55 | 32 |
P value = 0.00103 (Fisher's exact test), Q value = 0.0038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
AMP PEAK 23(17Q25.3) MUTATED | 29 | 65 | 15 | 35 |
AMP PEAK 23(17Q25.3) WILD-TYPE | 36 | 62 | 34 | 89 |
P value = 0.0014 (Fisher's exact test), Q value = 0.0049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 23(17Q25.3) MUTATED | 26 | 40 | 24 | 32 | 22 |
AMP PEAK 23(17Q25.3) WILD-TYPE | 18 | 55 | 32 | 90 | 26 |
P value = 0.0255 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 23(17Q25.3) MUTATED | 46 | 26 | 51 | 13 |
AMP PEAK 23(17Q25.3) WILD-TYPE | 46 | 61 | 68 | 29 |
P value = 0.015 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 23(17Q25.3) MUTATED | 32 | 37 | 26 | 18 | 23 |
AMP PEAK 23(17Q25.3) WILD-TYPE | 35 | 49 | 73 | 17 | 30 |
P value = 0.00017 (Fisher's exact test), Q value = 0.00089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 24(19P13.12) MUTATED | 14 | 19 | 36 |
AMP PEAK 24(19P13.12) WILD-TYPE | 74 | 148 | 79 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 24(19P13.12) MUTATED | 12 | 11 | 20 | 21 | 4 |
AMP PEAK 24(19P13.12) WILD-TYPE | 49 | 86 | 48 | 48 | 65 |
P value = 0.00054 (Fisher's exact test), Q value = 0.0022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 24(19P13.12) MUTATED | 16 | 13 | 12 | 23 | 4 |
AMP PEAK 24(19P13.12) WILD-TYPE | 38 | 43 | 102 | 61 | 52 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
AMP PEAK 24(19P13.12) MUTATED | 7 | 13 | 9 | 39 |
AMP PEAK 24(19P13.12) WILD-TYPE | 58 | 114 | 40 | 85 |
P value = 0.00246 (Fisher's exact test), Q value = 0.0075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 24(19P13.12) MUTATED | 3 | 20 | 14 | 29 | 2 |
AMP PEAK 24(19P13.12) WILD-TYPE | 41 | 75 | 42 | 93 | 46 |
P value = 6e-04 (Fisher's exact test), Q value = 0.0024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 24(19P13.12) MUTATED | 23 | 23 | 9 | 9 |
AMP PEAK 24(19P13.12) WILD-TYPE | 69 | 64 | 110 | 33 |
P value = 0.00129 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 24(19P13.12) MUTATED | 17 | 15 | 27 | 2 | 3 |
AMP PEAK 24(19P13.12) WILD-TYPE | 50 | 71 | 72 | 33 | 50 |
P value = 0.00239 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 25(19Q12) MUTATED | 16 | 25 | 37 |
AMP PEAK 25(19Q12) WILD-TYPE | 72 | 142 | 78 |
P value = 0.00154 (Fisher's exact test), Q value = 0.0052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 25(19Q12) MUTATED | 13 | 17 | 21 | 21 | 5 |
AMP PEAK 25(19Q12) WILD-TYPE | 48 | 80 | 47 | 48 | 64 |
P value = 0.00138 (Fisher's exact test), Q value = 0.0049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 25(19Q12) MUTATED | 14 | 16 | 17 | 26 | 4 |
AMP PEAK 25(19Q12) WILD-TYPE | 40 | 40 | 97 | 58 | 52 |
P value = 0.00111 (Fisher's exact test), Q value = 0.0041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
AMP PEAK 25(19Q12) MUTATED | 14 | 14 | 10 | 39 |
AMP PEAK 25(19Q12) WILD-TYPE | 51 | 113 | 39 | 85 |
P value = 0.0111 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 25(19Q12) MUTATED | 10 | 19 | 14 | 32 | 2 |
AMP PEAK 25(19Q12) WILD-TYPE | 34 | 76 | 42 | 90 | 46 |
P value = 0.00027 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 25(19Q12) MUTATED | 24 | 27 | 11 | 10 |
AMP PEAK 25(19Q12) WILD-TYPE | 68 | 60 | 108 | 32 |
P value = 0.002 (Fisher's exact test), Q value = 0.0064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 25(19Q12) MUTATED | 16 | 17 | 29 | 8 | 2 |
AMP PEAK 25(19Q12) WILD-TYPE | 51 | 69 | 70 | 27 | 51 |
P value = 0.0299 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 26(19Q13.11) MUTATED | 23 | 41 | 27 |
AMP PEAK 26(19Q13.11) WILD-TYPE | 86 | 83 | 110 |
P value = 0.00099 (Fisher's exact test), Q value = 0.0037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 26(19Q13.11) MUTATED | 20 | 20 | 23 | 21 | 6 |
AMP PEAK 26(19Q13.11) WILD-TYPE | 41 | 77 | 45 | 48 | 63 |
P value = 0.00062 (Fisher's exact test), Q value = 0.0024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 26(19Q13.11) MUTATED | 16 | 17 | 21 | 31 | 5 |
AMP PEAK 26(19Q13.11) WILD-TYPE | 38 | 39 | 93 | 53 | 51 |
P value = 0.00701 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
AMP PEAK 26(19Q13.11) MUTATED | 16 | 19 | 14 | 41 |
AMP PEAK 26(19Q13.11) WILD-TYPE | 49 | 108 | 35 | 83 |
P value = 0.00178 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 26(19Q13.11) MUTATED | 14 | 23 | 18 | 33 | 2 |
AMP PEAK 26(19Q13.11) WILD-TYPE | 30 | 72 | 38 | 89 | 46 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 26(19Q13.11) MUTATED | 32 | 27 | 11 | 15 |
AMP PEAK 26(19Q13.11) WILD-TYPE | 60 | 60 | 108 | 27 |
P value = 0.00046 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 26(19Q13.11) MUTATED | 21 | 22 | 29 | 11 | 2 |
AMP PEAK 26(19Q13.11) WILD-TYPE | 46 | 64 | 70 | 24 | 51 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 27(20Q13.13) MUTATED | 34 | 65 | 25 |
AMP PEAK 27(20Q13.13) WILD-TYPE | 75 | 59 | 112 |
P value = 0.0311 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 27(20Q13.13) MUTATED | 23 | 33 | 31 | 22 | 14 |
AMP PEAK 27(20Q13.13) WILD-TYPE | 38 | 64 | 37 | 47 | 55 |
P value = 0.00039 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 27(20Q13.13) MUTATED | 19 | 19 | 37 | 41 | 7 |
AMP PEAK 27(20Q13.13) WILD-TYPE | 35 | 37 | 77 | 43 | 49 |
P value = 0.0118 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 27(20Q13.13) MUTATED | 21 | 29 | 24 | 41 | 8 |
AMP PEAK 27(20Q13.13) WILD-TYPE | 23 | 66 | 32 | 81 | 40 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 27(20Q13.13) MUTATED | 41 | 27 | 23 | 25 |
AMP PEAK 27(20Q13.13) WILD-TYPE | 51 | 60 | 96 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 28(20Q13.33) MUTATED | 35 | 66 | 27 |
AMP PEAK 28(20Q13.33) WILD-TYPE | 74 | 58 | 110 |
P value = 0.00713 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 28(20Q13.33) MUTATED | 22 | 34 | 35 | 21 | 15 |
AMP PEAK 28(20Q13.33) WILD-TYPE | 39 | 63 | 33 | 48 | 54 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 28(20Q13.33) MUTATED | 21 | 17 | 39 | 43 | 7 |
AMP PEAK 28(20Q13.33) WILD-TYPE | 33 | 39 | 75 | 41 | 49 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 28(20Q13.33) MUTATED | 42 | 27 | 26 | 25 |
AMP PEAK 28(20Q13.33) WILD-TYPE | 50 | 60 | 93 | 17 |
P value = 9e-05 (Fisher's exact test), Q value = 0.00052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
AMP PEAK 29(XQ28) MUTATED | 41 | 25 | 19 |
AMP PEAK 29(XQ28) WILD-TYPE | 68 | 99 | 118 |
P value = 0.0294 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
AMP PEAK 29(XQ28) MUTATED | 12 | 47 | 26 |
AMP PEAK 29(XQ28) WILD-TYPE | 76 | 120 | 89 |
P value = 0.0409 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
AMP PEAK 29(XQ28) MUTATED | 12 | 25 | 11 | 12 | 25 |
AMP PEAK 29(XQ28) WILD-TYPE | 49 | 72 | 57 | 57 | 44 |
P value = 0.0161 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 29(XQ28) MUTATED | 12 | 11 | 30 | 11 | 21 |
AMP PEAK 29(XQ28) WILD-TYPE | 42 | 45 | 84 | 73 | 35 |
P value = 0.00924 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
AMP PEAK 29(XQ28) MUTATED | 10 | 42 | 7 | 25 |
AMP PEAK 29(XQ28) WILD-TYPE | 55 | 85 | 42 | 99 |
P value = 0.00492 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 29(XQ28) MUTATED | 5 | 24 | 14 | 21 | 20 |
AMP PEAK 29(XQ28) WILD-TYPE | 39 | 71 | 42 | 101 | 28 |
P value = 0.0473 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
AMP PEAK 29(XQ28) MUTATED | 21 | 15 | 36 | 5 |
AMP PEAK 29(XQ28) WILD-TYPE | 71 | 72 | 83 | 37 |
P value = 0.00034 (Fisher's exact test), Q value = 0.0015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
AMP PEAK 29(XQ28) MUTATED | 16 | 20 | 16 | 2 | 23 |
AMP PEAK 29(XQ28) WILD-TYPE | 51 | 66 | 83 | 33 | 30 |
P value = 0.00149 (Fisher's exact test), Q value = 0.0051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 1(1P36.31) MUTATED | 47 | 69 | 46 |
DEL PEAK 1(1P36.31) WILD-TYPE | 62 | 55 | 91 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 1(1P36.31) MUTATED | 25 | 64 | 73 |
DEL PEAK 1(1P36.31) WILD-TYPE | 63 | 103 | 42 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 1(1P36.31) MUTATED | 17 | 35 | 57 | 31 | 19 |
DEL PEAK 1(1P36.31) WILD-TYPE | 44 | 62 | 11 | 38 | 50 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 1(1P36.31) MUTATED | 24 | 24 | 40 | 57 | 14 |
DEL PEAK 1(1P36.31) WILD-TYPE | 30 | 32 | 74 | 27 | 42 |
P value = 0.00127 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 1(1P36.31) MUTATED | 14 | 37 | 31 | 65 | 12 |
DEL PEAK 1(1P36.31) WILD-TYPE | 30 | 58 | 25 | 57 | 36 |
P value = 0.0127 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 1(1P36.31) MUTATED | 48 | 40 | 39 | 23 |
DEL PEAK 1(1P36.31) WILD-TYPE | 44 | 47 | 80 | 19 |
P value = 0.00971 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 1(1P36.31) MUTATED | 31 | 36 | 56 | 12 | 15 |
DEL PEAK 1(1P36.31) WILD-TYPE | 36 | 50 | 43 | 23 | 38 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 2(1P36.11) MUTATED | 40 | 66 | 36 |
DEL PEAK 2(1P36.11) WILD-TYPE | 69 | 58 | 101 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 2(1P36.11) MUTATED | 22 | 49 | 71 |
DEL PEAK 2(1P36.11) WILD-TYPE | 66 | 118 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 2(1P36.11) MUTATED | 16 | 26 | 56 | 24 | 18 |
DEL PEAK 2(1P36.11) WILD-TYPE | 45 | 71 | 12 | 45 | 51 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 2(1P36.11) MUTATED | 22 | 19 | 31 | 54 | 14 |
DEL PEAK 2(1P36.11) WILD-TYPE | 32 | 37 | 83 | 30 | 42 |
P value = 0.00167 (Fisher's exact test), Q value = 0.0056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
DEL PEAK 2(1P36.11) MUTATED | 13 | 46 | 21 | 59 |
DEL PEAK 2(1P36.11) WILD-TYPE | 52 | 81 | 28 | 65 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 2(1P36.11) MUTATED | 9 | 30 | 25 | 64 | 11 |
DEL PEAK 2(1P36.11) WILD-TYPE | 35 | 65 | 31 | 58 | 37 |
P value = 0.00023 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 2(1P36.11) MUTATED | 46 | 37 | 28 | 21 |
DEL PEAK 2(1P36.11) WILD-TYPE | 46 | 50 | 91 | 21 |
P value = 0.00037 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 2(1P36.11) MUTATED | 28 | 27 | 55 | 8 | 14 |
DEL PEAK 2(1P36.11) WILD-TYPE | 39 | 59 | 44 | 27 | 39 |
P value = 0.00254 (Fisher's exact test), Q value = 0.0077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 3(2Q22.1) MUTATED | 15 | 16 | 12 | 7 | 2 |
DEL PEAK 3(2Q22.1) WILD-TYPE | 46 | 81 | 56 | 62 | 67 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 4(2Q37.3) MUTATED | 18 | 23 | 12 | 8 | 1 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 43 | 74 | 56 | 61 | 68 |
P value = 0.00081 (Fisher's exact test), Q value = 0.0031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 4(2Q37.3) MUTATED | 12 | 9 | 28 | 12 | 1 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 42 | 47 | 86 | 72 | 55 |
P value = 0.04 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
DEL PEAK 4(2Q37.3) MUTATED | 15 | 26 | 3 | 17 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 50 | 101 | 46 | 107 |
P value = 0.0098 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 4(2Q37.3) MUTATED | 11 | 16 | 16 | 15 | 3 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 33 | 79 | 40 | 107 | 45 |
P value = 0.00151 (Fisher's exact test), Q value = 0.0052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 4(2Q37.3) MUTATED | 20 | 14 | 10 | 10 | 4 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 47 | 72 | 89 | 25 | 49 |
P value = 0.0054 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 5(3P13) MUTATED | 14 | 36 | 23 |
DEL PEAK 5(3P13) WILD-TYPE | 95 | 88 | 114 |
P value = 0.0458 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 5(3P13) MUTATED | 17 | 25 | 31 |
DEL PEAK 5(3P13) WILD-TYPE | 71 | 142 | 84 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 5(3P13) MUTATED | 14 | 11 | 24 | 18 | 5 |
DEL PEAK 5(3P13) WILD-TYPE | 47 | 86 | 44 | 51 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 5(3P13) MUTATED | 23 | 5 | 15 | 24 | 5 |
DEL PEAK 5(3P13) WILD-TYPE | 31 | 51 | 99 | 60 | 51 |
P value = 0.00167 (Fisher's exact test), Q value = 0.0056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
DEL PEAK 5(3P13) MUTATED | 5 | 20 | 9 | 37 |
DEL PEAK 5(3P13) WILD-TYPE | 60 | 107 | 40 | 87 |
P value = 0.0339 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 5(3P13) MUTATED | 5 | 17 | 12 | 33 | 4 |
DEL PEAK 5(3P13) WILD-TYPE | 39 | 78 | 44 | 89 | 44 |
P value = 0.00028 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 5(3P13) MUTATED | 29 | 21 | 11 | 6 |
DEL PEAK 5(3P13) WILD-TYPE | 63 | 66 | 108 | 36 |
P value = 0.00202 (Fisher's exact test), Q value = 0.0064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 5(3P13) MUTATED | 20 | 13 | 27 | 3 | 4 |
DEL PEAK 5(3P13) WILD-TYPE | 47 | 73 | 72 | 32 | 49 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 6(4P16.3) MUTATED | 21 | 48 | 16 |
DEL PEAK 6(4P16.3) WILD-TYPE | 88 | 76 | 121 |
P value = 0.0273 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 6(4P16.3) MUTATED | 6 | 20 | 20 | 32 | 6 |
DEL PEAK 6(4P16.3) WILD-TYPE | 38 | 75 | 36 | 90 | 42 |
P value = 0.0453 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 6(4P16.3) MUTATED | 30 | 20 | 19 | 9 |
DEL PEAK 6(4P16.3) WILD-TYPE | 62 | 67 | 100 | 33 |
P value = 0.0068 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 6(4P16.3) MUTATED | 25 | 20 | 23 | 4 | 6 |
DEL PEAK 6(4P16.3) WILD-TYPE | 42 | 66 | 76 | 31 | 47 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 7(4Q21.3) MUTATED | 38 | 93 | 40 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 71 | 31 | 97 |
P value = 0.00281 (Fisher's exact test), Q value = 0.0083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 7(4Q21.3) MUTATED | 33 | 70 | 68 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 55 | 97 | 47 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 7(4Q21.3) MUTATED | 37 | 44 | 51 | 21 | 16 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 24 | 53 | 17 | 48 | 53 |
P value = 3e-04 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 7(4Q21.3) MUTATED | 28 | 22 | 55 | 51 | 13 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 26 | 34 | 59 | 33 | 43 |
P value = 0.00174 (Fisher's exact test), Q value = 0.0057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 7(4Q21.3) MUTATED | 20 | 45 | 32 | 63 | 10 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 24 | 50 | 24 | 59 | 38 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 7(4Q21.3) MUTATED | 56 | 38 | 40 | 29 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 36 | 49 | 79 | 13 |
P value = 0.00041 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 7(4Q21.3) MUTATED | 41 | 43 | 52 | 15 | 12 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 26 | 43 | 47 | 20 | 41 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 8(4Q22.3) MUTATED | 39 | 94 | 39 |
DEL PEAK 8(4Q22.3) WILD-TYPE | 70 | 30 | 98 |
P value = 0.00341 (Fisher's exact test), Q value = 0.0099
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 8(4Q22.3) MUTATED | 33 | 71 | 68 |
DEL PEAK 8(4Q22.3) WILD-TYPE | 55 | 96 | 47 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 8(4Q22.3) MUTATED | 36 | 44 | 51 | 21 | 17 |
DEL PEAK 8(4Q22.3) WILD-TYPE | 25 | 53 | 17 | 48 | 52 |
P value = 0.00022 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 8(4Q22.3) MUTATED | 28 | 22 | 54 | 52 | 13 |
DEL PEAK 8(4Q22.3) WILD-TYPE | 26 | 34 | 60 | 32 | 43 |
P value = 0.00121 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 8(4Q22.3) MUTATED | 22 | 43 | 32 | 64 | 10 |
DEL PEAK 8(4Q22.3) WILD-TYPE | 22 | 52 | 24 | 58 | 38 |
P value = 0.00011 (Fisher's exact test), Q value = 6e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 8(4Q22.3) MUTATED | 55 | 38 | 42 | 29 |
DEL PEAK 8(4Q22.3) WILD-TYPE | 37 | 49 | 77 | 13 |
P value = 0.00052 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 8(4Q22.3) MUTATED | 41 | 42 | 52 | 17 | 12 |
DEL PEAK 8(4Q22.3) WILD-TYPE | 26 | 44 | 47 | 18 | 41 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 9(4Q35.1) MUTATED | 43 | 94 | 35 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 66 | 30 | 102 |
P value = 0.00028 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 9(4Q35.1) MUTATED | 31 | 70 | 71 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 57 | 97 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 9(4Q35.1) MUTATED | 38 | 39 | 49 | 22 | 21 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 23 | 58 | 19 | 47 | 48 |
P value = 0.00067 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 9(4Q35.1) MUTATED | 28 | 22 | 48 | 54 | 17 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 26 | 34 | 66 | 30 | 39 |
P value = 0.00595 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 9(4Q35.1) MUTATED | 21 | 41 | 32 | 65 | 12 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 23 | 54 | 24 | 57 | 36 |
P value = 3e-04 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 9(4Q35.1) MUTATED | 53 | 40 | 40 | 28 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 39 | 47 | 79 | 14 |
P value = 0.00453 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 9(4Q35.1) MUTATED | 38 | 41 | 52 | 17 | 13 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 29 | 45 | 47 | 18 | 40 |
P value = 0.00878 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 10(6Q27) MUTATED | 39 | 58 | 39 |
DEL PEAK 10(6Q27) WILD-TYPE | 70 | 66 | 98 |
P value = 0.0272 (Fisher's exact test), Q value = 0.053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 10(6Q27) MUTATED | 23 | 72 | 41 |
DEL PEAK 10(6Q27) WILD-TYPE | 65 | 95 | 74 |
P value = 0.0397 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 10(6Q27) MUTATED | 20 | 25 | 18 | 45 | 24 |
DEL PEAK 10(6Q27) WILD-TYPE | 24 | 70 | 38 | 77 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 11(8P23.2) MUTATED | 103 | 86 | 58 |
DEL PEAK 11(8P23.2) WILD-TYPE | 6 | 38 | 79 |
P value = 0.0443 (Fisher's exact test), Q value = 0.078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 11(8P23.2) MUTATED | 49 | 118 | 80 |
DEL PEAK 11(8P23.2) WILD-TYPE | 39 | 49 | 35 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 12(8P12) MUTATED | 100 | 86 | 56 |
DEL PEAK 12(8P12) WILD-TYPE | 9 | 38 | 81 |
P value = 0.0239 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 12(8P12) MUTATED | 48 | 110 | 84 |
DEL PEAK 12(8P12) WILD-TYPE | 40 | 57 | 31 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 13(9P21.3) MUTATED | 40 | 70 | 40 |
DEL PEAK 13(9P21.3) WILD-TYPE | 69 | 54 | 97 |
P value = 0.00787 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 13(9P21.3) MUTATED | 29 | 61 | 60 |
DEL PEAK 13(9P21.3) WILD-TYPE | 59 | 106 | 55 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 13(9P21.3) MUTATED | 31 | 31 | 43 | 26 | 16 |
DEL PEAK 13(9P21.3) WILD-TYPE | 30 | 66 | 25 | 43 | 53 |
P value = 0.00199 (Fisher's exact test), Q value = 0.0064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 13(9P21.3) MUTATED | 28 | 20 | 38 | 46 | 15 |
DEL PEAK 13(9P21.3) WILD-TYPE | 26 | 36 | 76 | 38 | 41 |
P value = 0.00206 (Fisher's exact test), Q value = 0.0065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 13(9P21.3) MUTATED | 20 | 31 | 29 | 59 | 10 |
DEL PEAK 13(9P21.3) WILD-TYPE | 24 | 64 | 27 | 63 | 38 |
P value = 0.0192 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 13(9P21.3) MUTATED | 42 | 36 | 39 | 25 |
DEL PEAK 13(9P21.3) WILD-TYPE | 50 | 51 | 80 | 17 |
P value = 0.00773 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 13(9P21.3) MUTATED | 37 | 29 | 47 | 15 | 14 |
DEL PEAK 13(9P21.3) WILD-TYPE | 30 | 57 | 52 | 20 | 39 |
P value = 0.00199 (Fisher's exact test), Q value = 0.0064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 14(9Q31.3) MUTATED | 29 | 55 | 35 |
DEL PEAK 14(9Q31.3) WILD-TYPE | 80 | 69 | 102 |
P value = 0.0142 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 14(9Q31.3) MUTATED | 22 | 48 | 49 |
DEL PEAK 14(9Q31.3) WILD-TYPE | 66 | 119 | 66 |
P value = 0.00284 (Fisher's exact test), Q value = 0.0084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 14(9Q31.3) MUTATED | 25 | 34 | 28 | 21 | 10 |
DEL PEAK 14(9Q31.3) WILD-TYPE | 36 | 63 | 40 | 48 | 59 |
P value = 0.00032 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 14(9Q31.3) MUTATED | 21 | 16 | 38 | 37 | 6 |
DEL PEAK 14(9Q31.3) WILD-TYPE | 33 | 40 | 76 | 47 | 50 |
P value = 0.00661 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 14(9Q31.3) MUTATED | 17 | 30 | 21 | 43 | 5 |
DEL PEAK 14(9Q31.3) WILD-TYPE | 27 | 65 | 35 | 79 | 43 |
P value = 2e-04 (Fisher's exact test), Q value = 0.001
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 14(9Q31.3) MUTATED | 28 | 26 | 36 | 16 | 5 |
DEL PEAK 14(9Q31.3) WILD-TYPE | 39 | 60 | 63 | 19 | 48 |
P value = 0.0306 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 15(10Q23.31) MUTATED | 19 | 40 | 38 |
DEL PEAK 15(10Q23.31) WILD-TYPE | 90 | 84 | 99 |
P value = 0.0139 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 15(10Q23.31) MUTATED | 28 | 50 | 19 |
DEL PEAK 15(10Q23.31) WILD-TYPE | 60 | 117 | 96 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 15(10Q23.31) MUTATED | 35 | 34 | 5 | 15 | 5 |
DEL PEAK 15(10Q23.31) WILD-TYPE | 26 | 63 | 63 | 54 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 15(10Q23.31) MUTATED | 27 | 9 | 41 | 11 | 6 |
DEL PEAK 15(10Q23.31) WILD-TYPE | 27 | 47 | 73 | 73 | 50 |
P value = 0.0312 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
DEL PEAK 15(10Q23.31) MUTATED | 25 | 35 | 7 | 30 |
DEL PEAK 15(10Q23.31) WILD-TYPE | 40 | 92 | 42 | 94 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 15(10Q23.31) MUTATED | 15 | 41 | 13 | 25 | 3 |
DEL PEAK 15(10Q23.31) WILD-TYPE | 29 | 54 | 43 | 97 | 45 |
P value = 0.0481 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 15(10Q23.31) MUTATED | 35 | 22 | 30 | 7 |
DEL PEAK 15(10Q23.31) WILD-TYPE | 57 | 65 | 89 | 35 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 15(10Q23.31) MUTATED | 21 | 39 | 19 | 13 | 2 |
DEL PEAK 15(10Q23.31) WILD-TYPE | 46 | 47 | 80 | 22 | 51 |
P value = 0.00831 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 16(10Q26.13) MUTATED | 19 | 41 | 45 |
DEL PEAK 16(10Q26.13) WILD-TYPE | 90 | 83 | 92 |
P value = 0.048 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 16(10Q26.13) MUTATED | 32 | 49 | 24 |
DEL PEAK 16(10Q26.13) WILD-TYPE | 56 | 118 | 91 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 16(10Q26.13) MUTATED | 34 | 37 | 9 | 17 | 5 |
DEL PEAK 16(10Q26.13) WILD-TYPE | 27 | 60 | 59 | 52 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 16(10Q26.13) MUTATED | 30 | 11 | 41 | 14 | 6 |
DEL PEAK 16(10Q26.13) WILD-TYPE | 24 | 45 | 73 | 70 | 50 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 16(10Q26.13) MUTATED | 14 | 45 | 12 | 31 | 3 |
DEL PEAK 16(10Q26.13) WILD-TYPE | 30 | 50 | 44 | 91 | 45 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 16(10Q26.13) MUTATED | 22 | 41 | 24 | 13 | 2 |
DEL PEAK 16(10Q26.13) WILD-TYPE | 45 | 45 | 75 | 22 | 51 |
P value = 0.0115 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 17(11Q14.1) MUTATED | 22 | 36 | 19 |
DEL PEAK 17(11Q14.1) WILD-TYPE | 87 | 88 | 118 |
P value = 0.00037 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 17(11Q14.1) MUTATED | 33 | 12 | 16 | 10 |
DEL PEAK 17(11Q14.1) WILD-TYPE | 59 | 75 | 103 | 32 |
P value = 0.0125 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 17(11Q14.1) MUTATED | 23 | 21 | 15 | 6 | 6 |
DEL PEAK 17(11Q14.1) WILD-TYPE | 44 | 65 | 84 | 29 | 47 |
P value = 0.00428 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 18(11Q24.2) MUTATED | 24 | 45 | 26 |
DEL PEAK 18(11Q24.2) WILD-TYPE | 85 | 79 | 111 |
P value = 0.00077 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 18(11Q24.2) MUTATED | 38 | 17 | 21 | 11 |
DEL PEAK 18(11Q24.2) WILD-TYPE | 54 | 70 | 98 | 31 |
P value = 4e-04 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 18(11Q24.2) MUTATED | 29 | 27 | 19 | 5 | 7 |
DEL PEAK 18(11Q24.2) WILD-TYPE | 38 | 59 | 80 | 30 | 46 |
P value = 0.00047 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 19(12P12.1) MUTATED | 16 | 41 | 21 |
DEL PEAK 19(12P12.1) WILD-TYPE | 93 | 83 | 116 |
P value = 0.00211 (Fisher's exact test), Q value = 0.0066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 19(12P12.1) MUTATED | 24 | 24 | 10 | 10 | 10 |
DEL PEAK 19(12P12.1) WILD-TYPE | 37 | 73 | 58 | 59 | 59 |
P value = 0.0301 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 19(12P12.1) MUTATED | 14 | 27 | 8 | 21 | 6 |
DEL PEAK 19(12P12.1) WILD-TYPE | 30 | 68 | 48 | 101 | 42 |
P value = 0.00011 (Fisher's exact test), Q value = 6e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 20(12Q24.33) MUTATED | 9 | 34 | 16 |
DEL PEAK 20(12Q24.33) WILD-TYPE | 100 | 90 | 121 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 21(13Q14.2) MUTATED | 35 | 92 | 52 |
DEL PEAK 21(13Q14.2) WILD-TYPE | 74 | 32 | 85 |
P value = 0.00029 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 21(13Q14.2) MUTATED | 38 | 52 | 38 | 29 | 19 |
DEL PEAK 21(13Q14.2) WILD-TYPE | 23 | 45 | 30 | 40 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 21(13Q14.2) MUTATED | 34 | 15 | 67 | 46 | 14 |
DEL PEAK 21(13Q14.2) WILD-TYPE | 20 | 41 | 47 | 38 | 42 |
P value = 0.00271 (Fisher's exact test), Q value = 0.0081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
DEL PEAK 21(13Q14.2) MUTATED | 41 | 49 | 19 | 68 |
DEL PEAK 21(13Q14.2) WILD-TYPE | 24 | 78 | 30 | 56 |
P value = 0.00071 (Fisher's exact test), Q value = 0.0028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 21(13Q14.2) MUTATED | 28 | 53 | 26 | 59 | 11 |
DEL PEAK 21(13Q14.2) WILD-TYPE | 16 | 42 | 30 | 63 | 37 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 21(13Q14.2) MUTATED | 38 | 51 | 45 | 22 | 12 |
DEL PEAK 21(13Q14.2) WILD-TYPE | 29 | 35 | 54 | 13 | 41 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 22(14Q23.3) MUTATED | 21 | 78 | 32 |
DEL PEAK 22(14Q23.3) WILD-TYPE | 88 | 46 | 105 |
P value = 0.00012 (Fisher's exact test), Q value = 0.00064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 22(14Q23.3) MUTATED | 36 | 25 | 28 | 23 | 17 |
DEL PEAK 22(14Q23.3) WILD-TYPE | 25 | 72 | 40 | 46 | 52 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 22(14Q23.3) MUTATED | 34 | 12 | 38 | 32 | 13 |
DEL PEAK 22(14Q23.3) WILD-TYPE | 20 | 44 | 76 | 52 | 43 |
P value = 0.00665 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 22(14Q23.3) MUTATED | 47 | 31 | 33 | 14 |
DEL PEAK 22(14Q23.3) WILD-TYPE | 45 | 56 | 86 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 23(14Q32.33) MUTATED | 20 | 77 | 35 |
DEL PEAK 23(14Q32.33) WILD-TYPE | 89 | 47 | 102 |
P value = 0.00024 (Fisher's exact test), Q value = 0.0012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 23(14Q32.33) MUTATED | 35 | 25 | 28 | 25 | 17 |
DEL PEAK 23(14Q32.33) WILD-TYPE | 26 | 72 | 40 | 44 | 52 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 23(14Q32.33) MUTATED | 33 | 12 | 36 | 35 | 14 |
DEL PEAK 23(14Q32.33) WILD-TYPE | 21 | 44 | 78 | 49 | 42 |
P value = 0.0147 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 23(14Q32.33) MUTATED | 43 | 35 | 31 | 16 |
DEL PEAK 23(14Q32.33) WILD-TYPE | 49 | 52 | 88 | 26 |
P value = 0.0304 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 23(14Q32.33) MUTATED | 31 | 25 | 39 | 17 | 13 |
DEL PEAK 23(14Q32.33) WILD-TYPE | 36 | 61 | 60 | 18 | 40 |
P value = 0.0349 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 24(15Q26.3) MUTATED | 17 | 36 | 26 |
DEL PEAK 24(15Q26.3) WILD-TYPE | 92 | 88 | 111 |
P value = 0.0045 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 24(15Q26.3) MUTATED | 24 | 18 | 16 | 11 | 9 |
DEL PEAK 24(15Q26.3) WILD-TYPE | 37 | 79 | 52 | 58 | 60 |
P value = 0.00839 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 24(15Q26.3) MUTATED | 21 | 6 | 22 | 19 | 10 |
DEL PEAK 24(15Q26.3) WILD-TYPE | 33 | 50 | 92 | 65 | 46 |
P value = 0.00173 (Fisher's exact test), Q value = 0.0057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 24(15Q26.3) MUTATED | 29 | 12 | 19 | 15 |
DEL PEAK 24(15Q26.3) WILD-TYPE | 63 | 75 | 100 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 25(16Q23.1) MUTATED | 45 | 78 | 39 |
DEL PEAK 25(16Q23.1) WILD-TYPE | 64 | 46 | 98 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 25(16Q23.1) MUTATED | 28 | 60 | 74 |
DEL PEAK 25(16Q23.1) WILD-TYPE | 60 | 107 | 41 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 25(16Q23.1) MUTATED | 32 | 42 | 58 | 18 | 10 |
DEL PEAK 25(16Q23.1) WILD-TYPE | 29 | 55 | 10 | 51 | 59 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 25(16Q23.1) MUTATED | 25 | 18 | 52 | 57 | 8 |
DEL PEAK 25(16Q23.1) WILD-TYPE | 29 | 38 | 62 | 27 | 48 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 25(16Q23.1) MUTATED | 19 | 40 | 33 | 62 | 6 |
DEL PEAK 25(16Q23.1) WILD-TYPE | 25 | 55 | 23 | 60 | 42 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 25(16Q23.1) MUTATED | 54 | 36 | 36 | 28 |
DEL PEAK 25(16Q23.1) WILD-TYPE | 38 | 51 | 83 | 14 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 25(16Q23.1) MUTATED | 42 | 37 | 50 | 15 | 10 |
DEL PEAK 25(16Q23.1) WILD-TYPE | 25 | 49 | 49 | 20 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 26(17P13.1) MUTATED | 46 | 105 | 75 |
DEL PEAK 26(17P13.1) WILD-TYPE | 63 | 19 | 62 |
P value = 0.0214 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 26(17P13.1) MUTATED | 48 | 115 | 63 |
DEL PEAK 26(17P13.1) WILD-TYPE | 40 | 52 | 52 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 26(17P13.1) MUTATED | 49 | 69 | 36 | 34 | 33 |
DEL PEAK 26(17P13.1) WILD-TYPE | 12 | 28 | 32 | 35 | 36 |
P value = 1e-04 (Fisher's exact test), Q value = 0.00056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 26(17P13.1) MUTATED | 40 | 28 | 85 | 42 | 26 |
DEL PEAK 26(17P13.1) WILD-TYPE | 14 | 28 | 29 | 42 | 30 |
P value = 0.00172 (Fisher's exact test), Q value = 0.0057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
DEL PEAK 26(17P13.1) MUTATED | 53 | 76 | 27 | 68 |
DEL PEAK 26(17P13.1) WILD-TYPE | 12 | 51 | 22 | 56 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 26(17P13.1) MUTATED | 38 | 67 | 30 | 66 | 23 |
DEL PEAK 26(17P13.1) WILD-TYPE | 6 | 28 | 26 | 56 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 26(17P13.1) MUTATED | 36 | 67 | 55 | 31 | 25 |
DEL PEAK 26(17P13.1) WILD-TYPE | 31 | 19 | 44 | 4 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 27(17P11.2) MUTATED | 40 | 90 | 65 |
DEL PEAK 27(17P11.2) WILD-TYPE | 69 | 34 | 72 |
P value = 0.00145 (Fisher's exact test), Q value = 0.005
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 27(17P11.2) MUTATED | 44 | 57 | 32 | 31 | 28 |
DEL PEAK 27(17P11.2) WILD-TYPE | 17 | 40 | 36 | 38 | 41 |
P value = 0.00828 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 27(17P11.2) MUTATED | 37 | 27 | 68 | 37 | 23 |
DEL PEAK 27(17P11.2) WILD-TYPE | 17 | 29 | 46 | 47 | 33 |
P value = 1e-04 (Fisher's exact test), Q value = 0.00056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 65 | 127 | 49 | 124 |
DEL PEAK 27(17P11.2) MUTATED | 51 | 61 | 22 | 59 |
DEL PEAK 27(17P11.2) WILD-TYPE | 14 | 66 | 27 | 65 |
P value = 0.00029 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 27(17P11.2) MUTATED | 36 | 54 | 25 | 56 | 22 |
DEL PEAK 27(17P11.2) WILD-TYPE | 8 | 41 | 31 | 66 | 26 |
P value = 0.00022 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 27(17P11.2) MUTATED | 32 | 54 | 47 | 29 | 22 |
DEL PEAK 27(17P11.2) WILD-TYPE | 35 | 32 | 52 | 6 | 31 |
P value = 0.00138 (Fisher's exact test), Q value = 0.0049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 28(18Q21.2) MUTATED | 21 | 46 | 27 |
DEL PEAK 28(18Q21.2) WILD-TYPE | 88 | 78 | 110 |
P value = 0.00029 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 28(18Q21.2) MUTATED | 14 | 35 | 45 |
DEL PEAK 28(18Q21.2) WILD-TYPE | 74 | 132 | 70 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 28(18Q21.2) MUTATED | 9 | 5 | 28 | 39 | 13 |
DEL PEAK 28(18Q21.2) WILD-TYPE | 45 | 51 | 86 | 45 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 9.5e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 29(19P13.3) MUTATED | 18 | 51 | 18 |
DEL PEAK 29(19P13.3) WILD-TYPE | 91 | 73 | 119 |
P value = 0.00027 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 29(19P13.3) MUTATED | 29 | 18 | 15 | 12 | 12 |
DEL PEAK 29(19P13.3) WILD-TYPE | 32 | 79 | 53 | 57 | 57 |
P value = 0.00295 (Fisher's exact test), Q value = 0.0087
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 29(19P13.3) MUTATED | 22 | 9 | 23 | 25 | 7 |
DEL PEAK 29(19P13.3) WILD-TYPE | 32 | 47 | 91 | 59 | 49 |
P value = 0.0212 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 92 | 87 | 119 | 42 |
DEL PEAK 29(19P13.3) MUTATED | 32 | 19 | 20 | 12 |
DEL PEAK 29(19P13.3) WILD-TYPE | 60 | 68 | 99 | 30 |
P value = 0.00251 (Fisher's exact test), Q value = 0.0076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 99 | 35 | 53 |
DEL PEAK 29(19P13.3) MUTATED | 25 | 21 | 18 | 13 | 6 |
DEL PEAK 29(19P13.3) WILD-TYPE | 42 | 65 | 81 | 22 | 47 |
P value = 0.0437 (Fisher's exact test), Q value = 0.078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 30(20P12.1) MUTATED | 12 | 4 | 13 |
DEL PEAK 30(20P12.1) WILD-TYPE | 97 | 120 | 124 |
P value = 0.0296 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 31(22Q12.1) MUTATED | 14 | 30 | 35 |
DEL PEAK 31(22Q12.1) WILD-TYPE | 95 | 94 | 102 |
P value = 0.00168 (Fisher's exact test), Q value = 0.0056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 31(22Q12.1) MUTATED | 25 | 21 | 9 | 14 | 10 |
DEL PEAK 31(22Q12.1) WILD-TYPE | 36 | 76 | 59 | 55 | 59 |
P value = 0.0049 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 32(22Q13.32) MUTATED | 13 | 33 | 37 |
DEL PEAK 32(22Q13.32) WILD-TYPE | 96 | 91 | 100 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 61 | 97 | 68 | 69 | 69 |
DEL PEAK 32(22Q13.32) MUTATED | 27 | 27 | 7 | 12 | 10 |
DEL PEAK 32(22Q13.32) WILD-TYPE | 34 | 70 | 61 | 57 | 59 |
P value = 0.0104 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 32(22Q13.32) MUTATED | 16 | 6 | 36 | 16 | 9 |
DEL PEAK 32(22Q13.32) WILD-TYPE | 38 | 50 | 78 | 68 | 47 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 109 | 124 | 137 |
DEL PEAK 33(XQ26.2) MUTATED | 8 | 39 | 20 |
DEL PEAK 33(XQ26.2) WILD-TYPE | 101 | 85 | 117 |
P value = 0.0469 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 88 | 167 | 115 |
DEL PEAK 33(XQ26.2) MUTATED | 9 | 31 | 27 |
DEL PEAK 33(XQ26.2) WILD-TYPE | 79 | 136 | 88 |
-
Copy number data file = all_lesions.txt from GISTIC pipeline
-
Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/LIHC-TP/19782292/transformed.cor.cli.txt
-
Molecular subtype file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/LIHC-TP/20139336/LIHC-TP.transferedmergedcluster.txt
-
Number of patients = 370
-
Number of significantly focal cnvs = 62
-
Number of molecular subtypes = 8
-
Exclude genes that fewer than K tumors have alterations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.