This pipeline computes the correlation between significant copy number variation (cnv focal) genes and molecular subtypes.
Testing the association between copy number variation 63 focal events and 10 molecular subtypes across 184 patients, 269 significant findings detected with P value < 0.05 and Q value < 0.25.
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amp_1p34.2 cnv correlated to 'RPPA_CHIERARCHICAL'.
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amp_1q21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_2q36.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_3p12.2 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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amp_3q26.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_4p16.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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amp_6p21.31 cnv correlated to 'CN_CNMF' and 'MIRSEQ_MATURE_CNMF'.
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amp_7q22.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_8p11.22 cnv correlated to 'CN_CNMF'.
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amp_8p11.21 cnv correlated to 'CN_CNMF' and 'MIRSEQ_MATURE_CNMF'.
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amp_8q24.21 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_9p13.3 cnv correlated to 'CN_CNMF'.
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amp_12p13.33 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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amp_12p11.21 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_12q15 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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amp_15q26.1 cnv correlated to 'CN_CNMF'.
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amp_17p11.2 cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
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amp_17q12 cnv correlated to 'CN_CNMF'.
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amp_18q11.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_19p13.2 cnv correlated to 'CN_CNMF' and 'MIRSEQ_CNMF'.
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amp_19q13.2 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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amp_20p11.23 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_xp22.11 cnv correlated to 'CN_CNMF', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_xq27.1 cnv correlated to 'CN_CNMF'.
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del_1p36.32 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_1p36.11 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_2q14.3 cnv correlated to 'CN_CNMF'.
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del_3p21.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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del_4p15.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4q22.1 cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4q34.3 cnv correlated to 'CN_CNMF'.
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del_5q14.2 cnv correlated to 'CN_CNMF'.
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del_6p25.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_6p22.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_6q25.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_7q36.1 cnv correlated to 'CN_CNMF' and 'RPPA_CHIERARCHICAL'.
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del_8p23.2 cnv correlated to 'CN_CNMF' and 'MIRSEQ_MATURE_CNMF'.
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del_9p21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_10p15.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_10q23.33 cnv correlated to 'CN_CNMF'.
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del_11p15.4 cnv correlated to 'CN_CNMF' and 'RPPA_CNMF'.
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del_12p13.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_12q12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_12q21.33 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_12q24.33 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_13q14.2 cnv correlated to 'CN_CNMF' and 'MIRSEQ_MATURE_CNMF'.
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del_14q11.2 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_15q15.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_16q23.1 cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', and 'MRNASEQ_CHIERARCHICAL'.
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del_17p12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_17q22 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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del_18q21.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_19p13.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_19p13.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_19q13.33 cnv correlated to 'CN_CNMF'.
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del_21q11.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_22q13.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_22q13.32 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_xp21.1 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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del_xq11.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
del 12p13 1 | 29 (16%) | 155 |
3e-05 (0.00032) |
0.00071 (0.00452) |
0.00816 (0.0283) |
0.05 (0.117) |
0.0099 (0.0326) |
0.00134 (0.00767) |
0.00463 (0.0182) |
6e-05 (0.000548) |
0.0216 (0.0582) |
0.00051 (0.00349) |
del 12q21 33 | 44 (24%) | 140 |
1e-05 (0.00014) |
0.00137 (0.00778) |
0.0127 (0.0389) |
0.0206 (0.0567) |
0.00726 (0.0258) |
0.00179 (0.00917) |
0.00585 (0.022) |
0.00621 (0.023) |
0.00339 (0.0146) |
0.00141 (0.00793) |
del 12q24 33 | 43 (23%) | 141 |
2e-05 (0.000233) |
0.00209 (0.0104) |
0.0141 (0.0424) |
0.0144 (0.0429) |
0.00126 (0.00728) |
0.00333 (0.0145) |
0.00334 (0.0145) |
0.00059 (0.00391) |
0.00673 (0.0241) |
0.00017 (0.00134) |
del 6q25 3 | 91 (49%) | 93 |
1e-05 (0.00014) |
1e-05 (0.00014) |
0.0125 (0.0385) |
0.404 (0.509) |
0.00056 (0.00375) |
0.00476 (0.0185) |
0.00465 (0.0182) |
0.00016 (0.00128) |
1e-05 (0.00014) |
0.00015 (0.00126) |
del xq11 2 | 23 (12%) | 161 |
1e-05 (0.00014) |
0.00271 (0.0124) |
0.00163 (0.00863) |
0.288 (0.396) |
0.00894 (0.0301) |
0.0206 (0.0567) |
0.0043 (0.0174) |
0.0234 (0.0618) |
0.00447 (0.0178) |
0.016 (0.0465) |
amp 1q21 3 | 62 (34%) | 122 |
0.00281 (0.0127) |
1e-05 (0.00014) |
0.0658 (0.141) |
0.0767 (0.159) |
0.00123 (0.00717) |
0.011 (0.0345) |
0.00147 (0.00812) |
0.0157 (0.0459) |
0.00038 (0.00272) |
0.00258 (0.0121) |
del 6p25 2 | 74 (40%) | 110 |
1e-05 (0.00014) |
2e-05 (0.000233) |
0.00205 (0.0102) |
0.18 (0.287) |
0.0314 (0.0801) |
0.0124 (0.0385) |
0.0905 (0.177) |
0.00045 (0.00319) |
0.00143 (0.00797) |
0.00016 (0.00128) |
del 9p21 3 | 116 (63%) | 68 |
1e-05 (0.00014) |
1e-05 (0.00014) |
0.151 (0.255) |
0.568 (0.653) |
1e-05 (0.00014) |
0.0001 (0.000863) |
1e-05 (0.00014) |
1e-05 (0.00014) |
1e-05 (0.00014) |
1e-05 (0.00014) |
del 12q12 | 25 (14%) | 159 |
1e-05 (0.00014) |
0.00018 (0.00137) |
0.136 (0.235) |
0.221 (0.328) |
0.00405 (0.0167) |
0.00098 (0.00588) |
0.00237 (0.0113) |
0.021 (0.0568) |
0.00177 (0.00914) |
0.00294 (0.0132) |
del 17p12 | 89 (48%) | 95 |
1e-05 (0.00014) |
1e-05 (0.00014) |
0.227 (0.334) |
0.46 (0.561) |
1e-05 (0.00014) |
5e-05 (0.000485) |
1e-05 (0.00014) |
8e-05 (0.00072) |
1e-05 (0.00014) |
1e-05 (0.00014) |
del 17q22 | 49 (27%) | 135 |
1e-05 (0.00014) |
0.00163 (0.00863) |
0.00395 (0.0164) |
0.0598 (0.132) |
0.00999 (0.0326) |
0.0136 (0.0411) |
0.0086 (0.0291) |
0.0258 (0.0669) |
3e-05 (0.00032) |
0.0537 (0.123) |
del 18q21 2 | 126 (68%) | 58 |
1e-05 (0.00014) |
1e-05 (0.00014) |
0.242 (0.351) |
0.611 (0.686) |
4e-05 (0.000406) |
3e-05 (0.00032) |
0.00018 (0.00137) |
6e-05 (0.000548) |
0.00998 (0.0326) |
1e-05 (0.00014) |
amp 18q11 2 | 56 (30%) | 128 |
2e-05 (0.000233) |
0.00016 (0.00128) |
0.0745 (0.156) |
0.103 (0.195) |
0.0245 (0.0646) |
0.0757 (0.158) |
0.00268 (0.0124) |
0.00064 (0.00416) |
0.00378 (0.0158) |
0.00022 (0.00163) |
del 1p36 11 | 68 (37%) | 116 |
1e-05 (0.00014) |
1e-05 (0.00014) |
0.0167 (0.048) |
0.282 (0.39) |
0.00215 (0.0106) |
0.0179 (0.0505) |
0.108 (0.2) |
0.086 (0.171) |
0.00827 (0.0283) |
0.00558 (0.0214) |
del 6p22 2 | 70 (38%) | 114 |
1e-05 (0.00014) |
9e-05 (0.000787) |
0.0359 (0.0894) |
0.561 (0.648) |
0.0784 (0.161) |
0.0221 (0.0589) |
0.228 (0.335) |
0.00098 (0.00588) |
0.00262 (0.0122) |
0.00014 (0.00119) |
del 19p13 2 | 28 (15%) | 156 |
3e-05 (0.00032) |
3e-05 (0.00032) |
0.569 (0.653) |
0.083 (0.167) |
0.00623 (0.023) |
0.00359 (0.0154) |
0.0533 (0.122) |
0.00046 (0.00322) |
1e-05 (0.00014) |
0.00076 (0.00479) |
del 22q13 31 | 60 (33%) | 124 |
1e-05 (0.00014) |
6e-05 (0.000548) |
0.47 (0.57) |
0.896 (0.926) |
0.0133 (0.0402) |
0.0798 (0.163) |
0.0405 (0.1) |
0.0168 (0.048) |
9e-05 (0.000787) |
0.00108 (0.00642) |
amp 3q26 2 | 32 (17%) | 152 |
6e-05 (0.000548) |
2e-05 (0.000233) |
0.211 (0.319) |
0.0166 (0.048) |
0.0409 (0.101) |
0.0525 (0.121) |
0.218 (0.326) |
0.0176 (0.0499) |
0.00674 (0.0241) |
0.0869 (0.172) |
amp 7q22 1 | 56 (30%) | 128 |
1e-05 (0.00014) |
0.0077 (0.0271) |
0.0323 (0.0821) |
0.683 (0.751) |
0.143 (0.246) |
0.313 (0.416) |
0.0423 (0.104) |
0.0393 (0.0976) |
0.00587 (0.022) |
0.0662 (0.141) |
del 1p36 32 | 52 (28%) | 132 |
4e-05 (0.000406) |
1e-05 (0.00014) |
0.0488 (0.115) |
0.482 (0.576) |
0.0102 (0.0331) |
0.152 (0.256) |
0.175 (0.281) |
0.0644 (0.139) |
0.015 (0.0443) |
0.0176 (0.0499) |
del 4p15 31 | 30 (16%) | 154 |
0.011 (0.0345) |
0.00053 (0.00359) |
0.39 (0.496) |
0.529 (0.622) |
0.0357 (0.0892) |
0.0265 (0.0684) |
0.459 (0.561) |
0.00973 (0.0323) |
0.518 (0.611) |
0.0105 (0.0338) |
del 15q15 1 | 36 (20%) | 148 |
1e-05 (0.00014) |
0.0103 (0.0332) |
0.268 (0.373) |
0.437 (0.544) |
0.0457 (0.11) |
0.00328 (0.0145) |
0.184 (0.291) |
0.0335 (0.0845) |
0.124 (0.22) |
0.00571 (0.0218) |
del 19p13 3 | 36 (20%) | 148 |
2e-05 (0.000233) |
2e-05 (0.000233) |
0.782 (0.832) |
0.251 (0.359) |
0.0832 (0.167) |
0.00175 (0.00911) |
0.166 (0.274) |
0.0086 (0.0291) |
5e-05 (0.000485) |
0.00411 (0.0168) |
del 21q11 2 | 62 (34%) | 122 |
1e-05 (0.00014) |
0.0106 (0.0338) |
0.343 (0.446) |
0.21 (0.319) |
0.00925 (0.0308) |
0.0584 (0.13) |
0.374 (0.479) |
0.0218 (0.0582) |
0.00033 (0.00242) |
0.0187 (0.0523) |
amp 2q36 2 | 26 (14%) | 158 |
0.00016 (0.00128) |
0.00095 (0.00581) |
0.0565 (0.127) |
0.314 (0.416) |
0.0583 (0.13) |
0.0207 (0.0567) |
0.607 (0.683) |
0.00376 (0.0158) |
0.167 (0.275) |
0.00301 (0.0134) |
amp 12p11 21 | 43 (23%) | 141 |
1e-05 (0.00014) |
1e-05 (0.00014) |
0.495 (0.59) |
0.461 (0.561) |
0.245 (0.354) |
0.311 (0.416) |
0.0194 (0.0538) |
0.00759 (0.0269) |
0.00378 (0.0158) |
0.515 (0.609) |
del 10p15 3 | 41 (22%) | 143 |
0.00088 (0.00544) |
0.233 (0.34) |
0.897 (0.926) |
0.677 (0.747) |
0.028 (0.0718) |
0.0129 (0.0396) |
0.108 (0.2) |
0.0249 (0.0653) |
0.0572 (0.128) |
0.0065 (0.0235) |
amp 4p16 3 | 15 (8%) | 169 |
0.0437 (0.106) |
0.629 (0.7) |
0.139 (0.24) |
0.0705 (0.15) |
0.0328 (0.0831) |
0.019 (0.053) |
0.13 (0.23) |
0.0278 (0.0714) |
0.644 (0.714) |
0.138 (0.239) |
amp 8q24 21 | 74 (40%) | 110 |
1e-05 (0.00014) |
1e-05 (0.00014) |
0.104 (0.195) |
0.144 (0.247) |
0.132 (0.23) |
0.0613 (0.134) |
0.115 (0.209) |
0.056 (0.127) |
0.00272 (0.0124) |
0.0065 (0.0235) |
amp 20p11 23 | 38 (21%) | 146 |
1e-05 (0.00014) |
0.00155 (0.00849) |
0.0778 (0.161) |
0.118 (0.212) |
0.725 (0.782) |
0.392 (0.497) |
0.388 (0.496) |
0.0252 (0.066) |
0.00087 (0.00543) |
0.161 (0.266) |
del 3p21 31 | 51 (28%) | 133 |
2e-05 (0.000233) |
0.00444 (0.0178) |
0.241 (0.35) |
0.542 (0.631) |
0.208 (0.317) |
0.788 (0.836) |
0.0983 (0.189) |
0.0446 (0.108) |
0.0483 (0.114) |
0.213 (0.319) |
del 4q22 1 | 27 (15%) | 157 |
0.13 (0.229) |
0.0106 (0.0338) |
0.337 (0.441) |
0.145 (0.247) |
0.00496 (0.0192) |
0.0904 (0.177) |
0.132 (0.23) |
0.00159 (0.00863) |
0.226 (0.334) |
0.00574 (0.0218) |
del 22q13 32 | 62 (34%) | 122 |
1e-05 (0.00014) |
0.00021 (0.00157) |
0.861 (0.899) |
0.941 (0.959) |
0.152 (0.255) |
0.179 (0.285) |
0.155 (0.258) |
0.286 (0.395) |
0.00051 (0.00349) |
0.0447 (0.108) |
amp 12p13 33 | 39 (21%) | 145 |
1e-05 (0.00014) |
2e-05 (0.000233) |
0.403 (0.509) |
0.276 (0.383) |
0.771 (0.823) |
0.55 (0.638) |
0.122 (0.219) |
0.198 (0.304) |
0.00067 (0.00431) |
0.887 (0.919) |
amp 12q15 | 29 (16%) | 155 |
1e-05 (0.00014) |
0.00163 (0.00863) |
0.289 (0.396) |
0.0744 (0.156) |
0.805 (0.853) |
0.327 (0.432) |
0.0981 (0.189) |
0.0761 (0.158) |
0.0133 (0.0402) |
0.404 (0.509) |
amp 17p11 2 | 15 (8%) | 169 |
0.00227 (0.011) |
0.371 (0.475) |
0.369 (0.474) |
0.408 (0.512) |
0.181 (0.287) |
0.0495 (0.116) |
0.047 (0.113) |
0.112 (0.206) |
0.886 (0.919) |
0.311 (0.416) |
amp xp22 11 | 11 (6%) | 173 |
0.0146 (0.0435) |
0.227 (0.334) |
0.41 (0.513) |
0.0502 (0.117) |
0.108 (0.2) |
0.076 (0.158) |
0.0352 (0.0882) |
0.0913 (0.178) |
0.843 (0.887) |
0.00817 (0.0283) |
del 16q23 1 | 19 (10%) | 165 |
0.0153 (0.0449) |
0.528 (0.621) |
0.19 (0.295) |
0.00645 (0.0235) |
0.56 (0.647) |
0.0476 (0.113) |
0.299 (0.404) |
0.334 (0.439) |
0.153 (0.256) |
0.279 (0.386) |
del xp21 1 | 29 (16%) | 155 |
2e-05 (0.000233) |
0.0951 (0.184) |
0.0472 (0.113) |
0.577 (0.658) |
0.29 (0.397) |
0.451 (0.556) |
0.0564 (0.127) |
0.779 (0.83) |
0.0149 (0.044) |
0.481 (0.576) |
amp 3p12 2 | 12 (7%) | 172 |
0.00826 (0.0283) |
0.0122 (0.0382) |
0.0835 (0.167) |
0.767 (0.821) |
1 (1.00) |
0.92 (0.942) |
0.834 (0.878) |
1 (1.00) |
1 (1.00) |
0.717 (0.776) |
amp 6p21 31 | 12 (7%) | 172 |
0.00231 (0.0111) |
0.185 (0.292) |
0.681 (0.75) |
0.685 (0.751) |
0.297 (0.402) |
0.853 (0.896) |
0.479 (0.575) |
0.716 (0.776) |
0.00904 (0.0303) |
0.145 (0.247) |
amp 8p11 21 | 34 (18%) | 150 |
0.00621 (0.023) |
0.262 (0.37) |
0.239 (0.348) |
0.454 (0.559) |
0.592 (0.671) |
0.698 (0.762) |
0.858 (0.898) |
0.213 (0.319) |
0.0209 (0.0568) |
0.17 (0.277) |
amp 19p13 2 | 18 (10%) | 166 |
0.00169 (0.00887) |
0.256 (0.363) |
0.449 (0.556) |
0.345 (0.447) |
0.902 (0.93) |
0.71 (0.774) |
0.00457 (0.0181) |
0.112 (0.206) |
0.103 (0.195) |
0.267 (0.373) |
amp 19q13 2 | 47 (26%) | 137 |
1e-05 (0.00014) |
0.0255 (0.0664) |
0.343 (0.446) |
0.51 (0.604) |
0.95 (0.966) |
0.873 (0.908) |
0.575 (0.658) |
0.228 (0.335) |
0.389 (0.496) |
0.576 (0.658) |
del 7q36 1 | 15 (8%) | 169 |
0.00119 (0.00701) |
0.169 (0.277) |
0.154 (0.257) |
0.0218 (0.0582) |
0.211 (0.319) |
0.601 (0.678) |
0.905 (0.932) |
0.338 (0.441) |
0.0562 (0.127) |
0.25 (0.357) |
del 8p23 2 | 58 (32%) | 126 |
0.00018 (0.00137) |
0.0602 (0.132) |
0.296 (0.402) |
0.296 (0.402) |
0.356 (0.46) |
0.317 (0.419) |
0.175 (0.281) |
0.154 (0.257) |
0.0209 (0.0568) |
0.0663 (0.141) |
del 11p15 4 | 29 (16%) | 155 |
0.00063 (0.00413) |
0.82 (0.865) |
0.0019 (0.00965) |
0.0832 (0.167) |
0.929 (0.949) |
0.785 (0.834) |
0.464 (0.565) |
0.552 (0.639) |
0.17 (0.277) |
1 (1.00) |
del 13q14 2 | 20 (11%) | 164 |
0.0031 (0.0138) |
0.105 (0.196) |
0.973 (0.986) |
0.503 (0.598) |
0.0622 (0.135) |
0.263 (0.37) |
0.122 (0.219) |
0.0623 (0.135) |
0.00196 (0.00988) |
0.0903 (0.177) |
del 14q11 2 | 20 (11%) | 164 |
0.00371 (0.0158) |
0.00825 (0.0283) |
0.908 (0.933) |
0.739 (0.795) |
0.101 (0.192) |
0.131 (0.23) |
0.247 (0.355) |
0.247 (0.355) |
0.263 (0.37) |
0.536 (0.627) |
amp 1p34 2 | 13 (7%) | 171 |
0.113 (0.206) |
0.296 (0.402) |
0.171 (0.278) |
0.0435 (0.106) |
0.862 (0.899) |
0.264 (0.37) |
0.929 (0.949) |
0.917 (0.941) |
0.475 (0.575) |
0.424 (0.53) |
amp 8p11 22 | 34 (18%) | 150 |
0.0186 (0.0523) |
0.479 (0.575) |
0.124 (0.22) |
0.333 (0.438) |
1 (1.00) |
0.698 (0.762) |
0.81 (0.857) |
0.686 (0.752) |
0.05 (0.117) |
0.506 (0.601) |
amp 9p13 3 | 24 (13%) | 160 |
0.00224 (0.0109) |
0.714 (0.776) |
0.948 (0.965) |
0.313 (0.416) |
0.146 (0.248) |
0.39 (0.496) |
0.62 (0.692) |
0.0797 (0.163) |
0.739 (0.795) |
0.588 (0.67) |
amp 15q26 1 | 22 (12%) | 162 |
0.0108 (0.0341) |
0.0555 (0.126) |
0.333 (0.438) |
0.667 (0.737) |
0.212 (0.319) |
0.111 (0.206) |
0.451 (0.556) |
0.537 (0.627) |
0.363 (0.467) |
0.3 (0.404) |
amp 17q12 | 31 (17%) | 153 |
5e-05 (0.000485) |
0.114 (0.208) |
0.959 (0.973) |
0.986 (0.995) |
0.131 (0.23) |
0.213 (0.319) |
0.0804 (0.163) |
0.0589 (0.13) |
0.253 (0.361) |
0.127 (0.225) |
amp xq27 1 | 21 (11%) | 163 |
1e-05 (0.00014) |
0.311 (0.416) |
0.188 (0.293) |
0.3 (0.404) |
0.759 (0.814) |
0.195 (0.301) |
0.212 (0.319) |
0.458 (0.561) |
0.868 (0.904) |
0.652 (0.722) |
del 2q14 3 | 9 (5%) | 175 |
4e-05 (0.000406) |
0.118 (0.213) |
0.338 (0.441) |
0.197 (0.303) |
1 (1.00) |
0.476 (0.575) |
0.485 (0.578) |
0.72 (0.778) |
0.0946 (0.183) |
0.605 (0.682) |
del 4q34 3 | 35 (19%) | 149 |
0.00419 (0.017) |
0.0614 (0.134) |
0.105 (0.196) |
0.0539 (0.123) |
0.187 (0.293) |
0.623 (0.694) |
0.716 (0.776) |
0.172 (0.279) |
0.616 (0.69) |
0.232 (0.339) |
del 5q14 2 | 35 (19%) | 149 |
1e-05 (0.00014) |
0.0503 (0.117) |
0.291 (0.397) |
0.148 (0.251) |
0.192 (0.298) |
0.219 (0.327) |
0.102 (0.194) |
0.178 (0.285) |
0.0797 (0.163) |
0.0898 (0.177) |
del 10q23 33 | 35 (19%) | 149 |
0.00034 (0.00246) |
0.405 (0.509) |
0.568 (0.653) |
0.312 (0.416) |
0.451 (0.556) |
0.177 (0.284) |
0.758 (0.814) |
0.537 (0.627) |
0.631 (0.701) |
0.0903 (0.177) |
del 19q13 33 | 22 (12%) | 162 |
0.0025 (0.0118) |
0.151 (0.255) |
0.589 (0.67) |
0.531 (0.623) |
0.194 (0.3) |
0.227 (0.334) |
0.186 (0.293) |
0.0855 (0.171) |
0.254 (0.361) |
0.073 (0.154) |
amp 1p12 | 27 (15%) | 157 |
0.549 (0.638) |
0.197 (0.303) |
0.169 (0.277) |
0.202 (0.309) |
0.263 (0.37) |
0.441 (0.548) |
0.476 (0.575) |
0.263 (0.37) |
0.456 (0.56) |
0.0986 (0.189) |
del 9q22 33 | 47 (26%) | 137 |
0.0658 (0.141) |
0.25 (0.357) |
0.479 (0.575) |
0.174 (0.281) |
0.135 (0.235) |
0.429 (0.536) |
0.0816 (0.165) |
0.101 (0.192) |
0.156 (0.258) |
0.116 (0.209) |
del 18p11 31 | 54 (29%) | 130 |
0.35 (0.453) |
0.601 (0.678) |
0.266 (0.371) |
0.185 (0.291) |
0.614 (0.688) |
0.975 (0.986) |
0.188 (0.294) |
0.855 (0.896) |
0.59 (0.67) |
0.112 (0.206) |
P value = 0.0435 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
AMP PEAK 1(1P34.2) MUTATED | 1 | 3 | 0 | 3 | 0 |
AMP PEAK 1(1P34.2) WILD-TYPE | 46 | 22 | 16 | 13 | 18 |
P value = 0.00281 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 3(1Q21.3) MUTATED | 18 | 35 | 9 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 67 | 40 | 15 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 3(1Q21.3) MUTATED | 30 | 7 | 18 | 7 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 15 | 40 | 32 | 34 |
P value = 0.00123 (Fisher's exact test), Q value = 0.0072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
AMP PEAK 3(1Q21.3) MUTATED | 36 | 17 | 6 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 47 | 31 | 40 |
P value = 0.011 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
AMP PEAK 3(1Q21.3) MUTATED | 22 | 33 | 4 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 52 | 42 | 24 |
P value = 0.00147 (Fisher's exact test), Q value = 0.0081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
AMP PEAK 3(1Q21.3) MUTATED | 34 | 13 | 6 | 6 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 35 | 27 | 29 | 27 |
P value = 0.0157 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 3(1Q21.3) MUTATED | 42 | 12 | 5 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 60 | 30 | 28 |
P value = 0.00038 (Fisher's exact test), Q value = 0.0027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 3(1Q21.3) MUTATED | 35 | 13 | 10 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 34 | 54 | 27 |
P value = 0.00258 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
AMP PEAK 3(1Q21.3) MUTATED | 33 | 20 | 5 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 53 | 27 | 35 |
P value = 0.00016 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 4(2Q36.2) MUTATED | 3 | 19 | 4 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 82 | 56 | 20 |
P value = 0.00095 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 4(2Q36.2) MUTATED | 10 | 2 | 12 | 1 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 35 | 45 | 38 | 40 |
P value = 0.0207 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
AMP PEAK 4(2Q36.2) MUTATED | 10 | 15 | 0 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 64 | 60 | 28 |
P value = 0.00376 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 4(2Q36.2) MUTATED | 22 | 2 | 1 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 80 | 40 | 32 |
P value = 0.00301 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
AMP PEAK 4(2Q36.2) MUTATED | 20 | 4 | 1 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 66 | 43 | 39 |
P value = 0.00826 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 5(3P12.2) MUTATED | 2 | 5 | 5 |
AMP PEAK 5(3P12.2) WILD-TYPE | 83 | 70 | 19 |
P value = 0.0122 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 5(3P12.2) MUTATED | 7 | 1 | 4 | 0 |
AMP PEAK 5(3P12.2) WILD-TYPE | 38 | 46 | 46 | 41 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 6(3Q26.2) MUTATED | 4 | 18 | 10 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 81 | 57 | 14 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 6(3Q26.2) MUTATED | 12 | 1 | 17 | 2 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 33 | 46 | 33 | 39 |
P value = 0.0166 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
AMP PEAK 6(3Q26.2) MUTATED | 9 | 3 | 1 | 2 | 9 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 38 | 22 | 15 | 14 | 9 |
P value = 0.0409 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
AMP PEAK 6(3Q26.2) MUTATED | 21 | 6 | 4 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 62 | 42 | 42 |
P value = 0.0176 (Fisher's exact test), Q value = 0.05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 6(3Q26.2) MUTATED | 25 | 3 | 3 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 77 | 39 | 30 |
P value = 0.00674 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 6(3Q26.2) MUTATED | 19 | 5 | 6 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 50 | 62 | 31 |
P value = 0.0437 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 7(4P16.3) MUTATED | 4 | 6 | 5 |
AMP PEAK 7(4P16.3) WILD-TYPE | 81 | 69 | 19 |
P value = 0.0328 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
AMP PEAK 7(4P16.3) MUTATED | 6 | 1 | 8 |
AMP PEAK 7(4P16.3) WILD-TYPE | 77 | 47 | 38 |
P value = 0.019 (Fisher's exact test), Q value = 0.053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
AMP PEAK 7(4P16.3) MUTATED | 2 | 8 | 5 |
AMP PEAK 7(4P16.3) WILD-TYPE | 72 | 67 | 23 |
P value = 0.0278 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 7(4P16.3) MUTATED | 10 | 0 | 5 |
AMP PEAK 7(4P16.3) WILD-TYPE | 92 | 42 | 28 |
P value = 0.00231 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 8(6P21.31) MUTATED | 1 | 6 | 5 |
AMP PEAK 8(6P21.31) WILD-TYPE | 84 | 69 | 19 |
P value = 0.00904 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 8(6P21.31) MUTATED | 7 | 0 | 4 |
AMP PEAK 8(6P21.31) WILD-TYPE | 62 | 67 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 9(7Q22.1) MUTATED | 12 | 28 | 16 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 73 | 47 | 8 |
P value = 0.0077 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 9(7Q22.1) MUTATED | 17 | 9 | 22 | 7 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 28 | 38 | 28 | 34 |
P value = 0.0323 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
AMP PEAK 9(7Q22.1) MUTATED | 14 | 8 | 1 | 2 | 9 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 25 | 17 | 19 | 13 | 14 |
P value = 0.0423 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
AMP PEAK 9(7Q22.1) MUTATED | 29 | 8 | 7 | 9 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 40 | 32 | 28 | 24 |
P value = 0.0393 (Fisher's exact test), Q value = 0.098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 9(7Q22.1) MUTATED | 38 | 7 | 8 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 64 | 35 | 25 |
P value = 0.00587 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 9(7Q22.1) MUTATED | 27 | 11 | 14 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 42 | 56 | 23 |
P value = 0.0186 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 10(8P11.22) MUTATED | 10 | 15 | 9 |
AMP PEAK 10(8P11.22) WILD-TYPE | 75 | 60 | 15 |
P value = 0.00621 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 11(8P11.21) MUTATED | 10 | 14 | 10 |
AMP PEAK 11(8P11.21) WILD-TYPE | 75 | 61 | 14 |
P value = 0.0209 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 11(8P11.21) MUTATED | 14 | 6 | 11 |
AMP PEAK 11(8P11.21) WILD-TYPE | 55 | 61 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 12(8Q24.21) MUTATED | 14 | 41 | 19 |
AMP PEAK 12(8Q24.21) WILD-TYPE | 71 | 34 | 5 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 12(8Q24.21) MUTATED | 26 | 11 | 29 | 7 |
AMP PEAK 12(8Q24.21) WILD-TYPE | 19 | 36 | 21 | 34 |
P value = 0.00272 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 12(8Q24.21) MUTATED | 34 | 17 | 20 |
AMP PEAK 12(8Q24.21) WILD-TYPE | 35 | 50 | 17 |
P value = 0.0065 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
AMP PEAK 12(8Q24.21) MUTATED | 41 | 22 | 8 |
AMP PEAK 12(8Q24.21) WILD-TYPE | 45 | 25 | 32 |
P value = 0.00224 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 13(9P13.3) MUTATED | 5 | 11 | 8 |
AMP PEAK 13(9P13.3) WILD-TYPE | 80 | 64 | 16 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 14(12P13.33) MUTATED | 2 | 15 | 22 |
AMP PEAK 14(12P13.33) WILD-TYPE | 83 | 60 | 2 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 14(12P13.33) MUTATED | 15 | 8 | 16 | 0 |
AMP PEAK 14(12P13.33) WILD-TYPE | 30 | 39 | 34 | 41 |
P value = 0.00067 (Fisher's exact test), Q value = 0.0043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 14(12P13.33) MUTATED | 19 | 5 | 13 |
AMP PEAK 14(12P13.33) WILD-TYPE | 50 | 62 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 15(12P11.21) MUTATED | 2 | 21 | 20 |
AMP PEAK 15(12P11.21) WILD-TYPE | 83 | 54 | 4 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 15(12P11.21) MUTATED | 20 | 7 | 15 | 1 |
AMP PEAK 15(12P11.21) WILD-TYPE | 25 | 40 | 35 | 40 |
P value = 0.0194 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
AMP PEAK 15(12P11.21) MUTATED | 20 | 5 | 4 | 12 |
AMP PEAK 15(12P11.21) WILD-TYPE | 49 | 35 | 31 | 21 |
P value = 0.00759 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 15(12P11.21) MUTATED | 27 | 3 | 11 |
AMP PEAK 15(12P11.21) WILD-TYPE | 75 | 39 | 22 |
P value = 0.00378 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 15(12P11.21) MUTATED | 20 | 7 | 13 |
AMP PEAK 15(12P11.21) WILD-TYPE | 49 | 60 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 16(12Q15) MUTATED | 2 | 10 | 17 |
AMP PEAK 16(12Q15) WILD-TYPE | 83 | 65 | 7 |
P value = 0.00163 (Fisher's exact test), Q value = 0.0086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 16(12Q15) MUTATED | 10 | 7 | 12 | 0 |
AMP PEAK 16(12Q15) WILD-TYPE | 35 | 40 | 38 | 41 |
P value = 0.0133 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 16(12Q15) MUTATED | 11 | 5 | 11 |
AMP PEAK 16(12Q15) WILD-TYPE | 58 | 62 | 26 |
P value = 0.0108 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 17(15Q26.1) MUTATED | 4 | 13 | 5 |
AMP PEAK 17(15Q26.1) WILD-TYPE | 81 | 62 | 19 |
P value = 0.00227 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 18(17P11.2) MUTATED | 4 | 4 | 7 |
AMP PEAK 18(17P11.2) WILD-TYPE | 81 | 71 | 17 |
P value = 0.0495 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
AMP PEAK 18(17P11.2) MUTATED | 4 | 5 | 6 |
AMP PEAK 18(17P11.2) WILD-TYPE | 70 | 70 | 22 |
P value = 0.047 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
AMP PEAK 18(17P11.2) MUTATED | 4 | 3 | 1 | 7 |
AMP PEAK 18(17P11.2) WILD-TYPE | 65 | 37 | 34 | 26 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 19(17Q12) MUTATED | 4 | 20 | 7 |
AMP PEAK 19(17Q12) WILD-TYPE | 81 | 55 | 17 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 20(18Q11.2) MUTATED | 10 | 36 | 10 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 75 | 39 | 14 |
P value = 0.00016 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 20(18Q11.2) MUTATED | 19 | 7 | 23 | 6 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 26 | 40 | 27 | 35 |
P value = 0.0245 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
AMP PEAK 20(18Q11.2) MUTATED | 33 | 13 | 8 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 50 | 35 | 38 |
P value = 0.00268 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
AMP PEAK 20(18Q11.2) MUTATED | 32 | 10 | 5 | 7 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 37 | 30 | 30 | 26 |
P value = 0.00064 (Fisher's exact test), Q value = 0.0042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 20(18Q11.2) MUTATED | 42 | 9 | 3 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 60 | 33 | 30 |
P value = 0.00378 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 20(18Q11.2) MUTATED | 31 | 13 | 9 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 38 | 54 | 28 |
P value = 0.00022 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
AMP PEAK 20(18Q11.2) MUTATED | 36 | 14 | 3 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 50 | 33 | 37 |
P value = 0.00169 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 21(19P13.2) MUTATED | 3 | 8 | 7 |
AMP PEAK 21(19P13.2) WILD-TYPE | 82 | 67 | 17 |
P value = 0.00457 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
AMP PEAK 21(19P13.2) MUTATED | 11 | 1 | 0 | 6 |
AMP PEAK 21(19P13.2) WILD-TYPE | 58 | 39 | 35 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 22(19Q13.2) MUTATED | 8 | 28 | 11 |
AMP PEAK 22(19Q13.2) WILD-TYPE | 77 | 47 | 13 |
P value = 0.0255 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 22(19Q13.2) MUTATED | 10 | 8 | 21 | 8 |
AMP PEAK 22(19Q13.2) WILD-TYPE | 35 | 39 | 29 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 23(20P11.23) MUTATED | 7 | 15 | 16 |
AMP PEAK 23(20P11.23) WILD-TYPE | 78 | 60 | 8 |
P value = 0.00155 (Fisher's exact test), Q value = 0.0085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
AMP PEAK 23(20P11.23) MUTATED | 17 | 8 | 10 | 2 |
AMP PEAK 23(20P11.23) WILD-TYPE | 28 | 39 | 40 | 39 |
P value = 0.0252 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 23(20P11.23) MUTATED | 27 | 3 | 7 |
AMP PEAK 23(20P11.23) WILD-TYPE | 75 | 39 | 26 |
P value = 0.00087 (Fisher's exact test), Q value = 0.0054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
AMP PEAK 23(20P11.23) MUTATED | 18 | 5 | 13 |
AMP PEAK 23(20P11.23) WILD-TYPE | 51 | 62 | 24 |
P value = 0.0146 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 24(XP22.11) MUTATED | 3 | 3 | 5 |
AMP PEAK 24(XP22.11) WILD-TYPE | 82 | 72 | 19 |
P value = 0.0352 (Fisher's exact test), Q value = 0.088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
AMP PEAK 24(XP22.11) MUTATED | 3 | 1 | 1 | 6 |
AMP PEAK 24(XP22.11) WILD-TYPE | 66 | 39 | 34 | 27 |
P value = 0.00817 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
AMP PEAK 24(XP22.11) MUTATED | 4 | 0 | 6 |
AMP PEAK 24(XP22.11) WILD-TYPE | 82 | 47 | 34 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
AMP PEAK 25(XQ27.1) MUTATED | 2 | 9 | 10 |
AMP PEAK 25(XQ27.1) WILD-TYPE | 83 | 66 | 14 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 1(1P36.32) MUTATED | 12 | 26 | 14 |
DEL PEAK 1(1P36.32) WILD-TYPE | 73 | 49 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 1(1P36.32) MUTATED | 28 | 10 | 11 | 3 |
DEL PEAK 1(1P36.32) WILD-TYPE | 17 | 37 | 39 | 38 |
P value = 0.0488 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 1(1P36.32) MUTATED | 18 | 3 | 7 | 3 | 7 |
DEL PEAK 1(1P36.32) WILD-TYPE | 21 | 22 | 13 | 12 | 16 |
P value = 0.0102 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 1(1P36.32) MUTATED | 28 | 15 | 5 |
DEL PEAK 1(1P36.32) WILD-TYPE | 55 | 33 | 41 |
P value = 0.015 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 1(1P36.32) MUTATED | 22 | 10 | 14 |
DEL PEAK 1(1P36.32) WILD-TYPE | 47 | 57 | 23 |
P value = 0.0176 (Fisher's exact test), Q value = 0.05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 1(1P36.32) MUTATED | 28 | 14 | 4 |
DEL PEAK 1(1P36.32) WILD-TYPE | 58 | 33 | 36 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 2(1P36.11) MUTATED | 16 | 36 | 16 |
DEL PEAK 2(1P36.11) WILD-TYPE | 69 | 39 | 8 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 2(1P36.11) MUTATED | 36 | 12 | 17 | 3 |
DEL PEAK 2(1P36.11) WILD-TYPE | 9 | 35 | 33 | 38 |
P value = 0.0167 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 2(1P36.11) MUTATED | 24 | 6 | 9 | 4 | 7 |
DEL PEAK 2(1P36.11) WILD-TYPE | 15 | 19 | 11 | 11 | 16 |
P value = 0.00215 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 2(1P36.11) MUTATED | 36 | 21 | 7 |
DEL PEAK 2(1P36.11) WILD-TYPE | 47 | 27 | 39 |
P value = 0.0179 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 2(1P36.11) MUTATED | 27 | 33 | 4 |
DEL PEAK 2(1P36.11) WILD-TYPE | 47 | 42 | 24 |
P value = 0.00827 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 2(1P36.11) MUTATED | 29 | 15 | 18 |
DEL PEAK 2(1P36.11) WILD-TYPE | 40 | 52 | 19 |
P value = 0.00558 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 2(1P36.11) MUTATED | 36 | 20 | 6 |
DEL PEAK 2(1P36.11) WILD-TYPE | 50 | 27 | 34 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 3(2Q14.3) MUTATED | 0 | 3 | 6 |
DEL PEAK 3(2Q14.3) WILD-TYPE | 85 | 72 | 18 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 4(3P21.31) MUTATED | 11 | 26 | 14 |
DEL PEAK 4(3P21.31) WILD-TYPE | 74 | 49 | 10 |
P value = 0.00444 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 4(3P21.31) MUTATED | 19 | 9 | 18 | 5 |
DEL PEAK 4(3P21.31) WILD-TYPE | 26 | 38 | 32 | 36 |
P value = 0.0446 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 4(3P21.31) MUTATED | 35 | 6 | 8 |
DEL PEAK 4(3P21.31) WILD-TYPE | 67 | 36 | 25 |
P value = 0.0483 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 4(3P21.31) MUTATED | 25 | 12 | 11 |
DEL PEAK 4(3P21.31) WILD-TYPE | 44 | 55 | 26 |
P value = 0.011 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 5(4P15.31) MUTATED | 7 | 19 | 4 |
DEL PEAK 5(4P15.31) WILD-TYPE | 78 | 56 | 20 |
P value = 0.00053 (Fisher's exact test), Q value = 0.0036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 5(4P15.31) MUTATED | 14 | 1 | 11 | 4 |
DEL PEAK 5(4P15.31) WILD-TYPE | 31 | 46 | 39 | 37 |
P value = 0.0357 (Fisher's exact test), Q value = 0.089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 5(4P15.31) MUTATED | 20 | 4 | 5 |
DEL PEAK 5(4P15.31) WILD-TYPE | 63 | 44 | 41 |
P value = 0.0265 (Fisher's exact test), Q value = 0.068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 5(4P15.31) MUTATED | 8 | 19 | 2 |
DEL PEAK 5(4P15.31) WILD-TYPE | 66 | 56 | 26 |
P value = 0.00973 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 5(4P15.31) MUTATED | 24 | 2 | 3 |
DEL PEAK 5(4P15.31) WILD-TYPE | 78 | 40 | 30 |
P value = 0.0105 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 5(4P15.31) MUTATED | 21 | 5 | 2 |
DEL PEAK 5(4P15.31) WILD-TYPE | 65 | 42 | 38 |
P value = 0.0106 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 6(4Q22.1) MUTATED | 11 | 1 | 8 | 7 |
DEL PEAK 6(4Q22.1) WILD-TYPE | 34 | 46 | 42 | 34 |
P value = 0.00496 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 6(4Q22.1) MUTATED | 15 | 1 | 10 |
DEL PEAK 6(4Q22.1) WILD-TYPE | 68 | 47 | 36 |
P value = 0.00159 (Fisher's exact test), Q value = 0.0086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 6(4Q22.1) MUTATED | 19 | 0 | 7 |
DEL PEAK 6(4Q22.1) WILD-TYPE | 83 | 42 | 26 |
P value = 0.00574 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 6(4Q22.1) MUTATED | 18 | 1 | 6 |
DEL PEAK 6(4Q22.1) WILD-TYPE | 68 | 46 | 34 |
P value = 0.00419 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 7(4Q34.3) MUTATED | 9 | 23 | 3 |
DEL PEAK 7(4Q34.3) WILD-TYPE | 76 | 52 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 8(5Q14.2) MUTATED | 4 | 24 | 7 |
DEL PEAK 8(5Q14.2) WILD-TYPE | 81 | 51 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 9(6P25.2) MUTATED | 15 | 45 | 14 |
DEL PEAK 9(6P25.2) WILD-TYPE | 70 | 30 | 10 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 9(6P25.2) MUTATED | 26 | 9 | 29 | 9 |
DEL PEAK 9(6P25.2) WILD-TYPE | 19 | 38 | 21 | 32 |
P value = 0.00205 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 9(6P25.2) MUTATED | 26 | 5 | 8 | 4 | 8 |
DEL PEAK 9(6P25.2) WILD-TYPE | 13 | 20 | 12 | 11 | 15 |
P value = 0.0314 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 9(6P25.2) MUTATED | 39 | 20 | 11 |
DEL PEAK 9(6P25.2) WILD-TYPE | 44 | 28 | 35 |
P value = 0.0124 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 9(6P25.2) MUTATED | 28 | 37 | 5 |
DEL PEAK 9(6P25.2) WILD-TYPE | 46 | 38 | 23 |
P value = 0.00045 (Fisher's exact test), Q value = 0.0032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 9(6P25.2) MUTATED | 53 | 10 | 7 |
DEL PEAK 9(6P25.2) WILD-TYPE | 49 | 32 | 26 |
P value = 0.00143 (Fisher's exact test), Q value = 0.008
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 9(6P25.2) MUTATED | 36 | 16 | 18 |
DEL PEAK 9(6P25.2) WILD-TYPE | 33 | 51 | 19 |
P value = 0.00016 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 9(6P25.2) MUTATED | 46 | 18 | 6 |
DEL PEAK 9(6P25.2) WILD-TYPE | 40 | 29 | 34 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 10(6P22.2) MUTATED | 16 | 41 | 13 |
DEL PEAK 10(6P22.2) WILD-TYPE | 69 | 34 | 11 |
P value = 9e-05 (Fisher's exact test), Q value = 0.00079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 10(6P22.2) MUTATED | 24 | 9 | 27 | 9 |
DEL PEAK 10(6P22.2) WILD-TYPE | 21 | 38 | 23 | 32 |
P value = 0.0359 (Fisher's exact test), Q value = 0.089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 10(6P22.2) MUTATED | 23 | 6 | 8 | 4 | 7 |
DEL PEAK 10(6P22.2) WILD-TYPE | 16 | 19 | 12 | 11 | 16 |
P value = 0.0221 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 10(6P22.2) MUTATED | 26 | 35 | 5 |
DEL PEAK 10(6P22.2) WILD-TYPE | 48 | 40 | 23 |
P value = 0.00098 (Fisher's exact test), Q value = 0.0059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 10(6P22.2) MUTATED | 50 | 9 | 7 |
DEL PEAK 10(6P22.2) WILD-TYPE | 52 | 33 | 26 |
P value = 0.00262 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 10(6P22.2) MUTATED | 33 | 15 | 18 |
DEL PEAK 10(6P22.2) WILD-TYPE | 36 | 52 | 19 |
P value = 0.00014 (Fisher's exact test), Q value = 0.0012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 10(6P22.2) MUTATED | 45 | 15 | 6 |
DEL PEAK 10(6P22.2) WILD-TYPE | 41 | 32 | 34 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 11(6Q25.3) MUTATED | 21 | 54 | 16 |
DEL PEAK 11(6Q25.3) WILD-TYPE | 64 | 21 | 8 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 11(6Q25.3) MUTATED | 29 | 12 | 36 | 13 |
DEL PEAK 11(6Q25.3) WILD-TYPE | 16 | 35 | 14 | 28 |
P value = 0.0125 (Fisher's exact test), Q value = 0.039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 11(6Q25.3) MUTATED | 27 | 8 | 11 | 4 | 13 |
DEL PEAK 11(6Q25.3) WILD-TYPE | 12 | 17 | 9 | 11 | 10 |
P value = 0.00056 (Fisher's exact test), Q value = 0.0038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 11(6Q25.3) MUTATED | 52 | 21 | 13 |
DEL PEAK 11(6Q25.3) WILD-TYPE | 31 | 27 | 33 |
P value = 0.00476 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 11(6Q25.3) MUTATED | 34 | 45 | 7 |
DEL PEAK 11(6Q25.3) WILD-TYPE | 40 | 30 | 21 |
P value = 0.00465 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 11(6Q25.3) MUTATED | 45 | 16 | 14 | 11 |
DEL PEAK 11(6Q25.3) WILD-TYPE | 24 | 24 | 21 | 22 |
P value = 0.00016 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 11(6Q25.3) MUTATED | 63 | 12 | 11 |
DEL PEAK 11(6Q25.3) WILD-TYPE | 39 | 30 | 22 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 11(6Q25.3) MUTATED | 47 | 17 | 21 |
DEL PEAK 11(6Q25.3) WILD-TYPE | 22 | 50 | 16 |
P value = 0.00015 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 11(6Q25.3) MUTATED | 54 | 22 | 9 |
DEL PEAK 11(6Q25.3) WILD-TYPE | 32 | 25 | 31 |
P value = 0.00119 (Fisher's exact test), Q value = 0.007
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 12(7Q36.1) MUTATED | 1 | 10 | 4 |
DEL PEAK 12(7Q36.1) WILD-TYPE | 84 | 65 | 20 |
P value = 0.0218 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
DEL PEAK 12(7Q36.1) MUTATED | 1 | 4 | 2 | 0 | 4 |
DEL PEAK 12(7Q36.1) WILD-TYPE | 46 | 21 | 14 | 16 | 14 |
P value = 0.00018 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 13(8P23.2) MUTATED | 14 | 33 | 11 |
DEL PEAK 13(8P23.2) WILD-TYPE | 71 | 42 | 13 |
P value = 0.0209 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 13(8P23.2) MUTATED | 25 | 14 | 17 |
DEL PEAK 13(8P23.2) WILD-TYPE | 44 | 53 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 14(9P21.3) MUTATED | 31 | 69 | 16 |
DEL PEAK 14(9P21.3) WILD-TYPE | 54 | 6 | 8 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 14(9P21.3) MUTATED | 38 | 15 | 45 | 17 |
DEL PEAK 14(9P21.3) WILD-TYPE | 7 | 32 | 5 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 14(9P21.3) MUTATED | 68 | 26 | 15 |
DEL PEAK 14(9P21.3) WILD-TYPE | 15 | 22 | 31 |
P value = 1e-04 (Fisher's exact test), Q value = 0.00086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 14(9P21.3) MUTATED | 44 | 57 | 8 |
DEL PEAK 14(9P21.3) WILD-TYPE | 30 | 18 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 14(9P21.3) MUTATED | 60 | 20 | 18 | 11 |
DEL PEAK 14(9P21.3) WILD-TYPE | 9 | 20 | 17 | 22 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 14(9P21.3) MUTATED | 80 | 17 | 12 |
DEL PEAK 14(9P21.3) WILD-TYPE | 22 | 25 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 14(9P21.3) MUTATED | 60 | 26 | 22 |
DEL PEAK 14(9P21.3) WILD-TYPE | 9 | 41 | 15 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 14(9P21.3) MUTATED | 68 | 28 | 12 |
DEL PEAK 14(9P21.3) WILD-TYPE | 18 | 19 | 28 |
P value = 0.00088 (Fisher's exact test), Q value = 0.0054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 16(10P15.3) MUTATED | 10 | 20 | 11 |
DEL PEAK 16(10P15.3) WILD-TYPE | 75 | 55 | 13 |
P value = 0.028 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 16(10P15.3) MUTATED | 25 | 5 | 10 |
DEL PEAK 16(10P15.3) WILD-TYPE | 58 | 43 | 36 |
P value = 0.0129 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 16(10P15.3) MUTATED | 10 | 25 | 5 |
DEL PEAK 16(10P15.3) WILD-TYPE | 64 | 50 | 23 |
P value = 0.0249 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 16(10P15.3) MUTATED | 30 | 4 | 6 |
DEL PEAK 16(10P15.3) WILD-TYPE | 72 | 38 | 27 |
P value = 0.0065 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 16(10P15.3) MUTATED | 28 | 7 | 4 |
DEL PEAK 16(10P15.3) WILD-TYPE | 58 | 40 | 36 |
P value = 0.00034 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 17(10Q23.33) MUTATED | 7 | 18 | 10 |
DEL PEAK 17(10Q23.33) WILD-TYPE | 78 | 57 | 14 |
P value = 0.00063 (Fisher's exact test), Q value = 0.0041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 18(11P15.4) MUTATED | 5 | 16 | 8 |
DEL PEAK 18(11P15.4) WILD-TYPE | 80 | 59 | 16 |
P value = 0.0019 (Fisher's exact test), Q value = 0.0097
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 18(11P15.4) MUTATED | 10 | 1 | 0 | 1 | 8 |
DEL PEAK 18(11P15.4) WILD-TYPE | 29 | 24 | 20 | 14 | 15 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 19(12P13.1) MUTATED | 4 | 23 | 2 |
DEL PEAK 19(12P13.1) WILD-TYPE | 81 | 52 | 22 |
P value = 0.00071 (Fisher's exact test), Q value = 0.0045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 19(12P13.1) MUTATED | 9 | 1 | 15 | 4 |
DEL PEAK 19(12P13.1) WILD-TYPE | 36 | 46 | 35 | 37 |
P value = 0.00816 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 19(12P13.1) MUTATED | 12 | 2 | 0 | 1 | 2 |
DEL PEAK 19(12P13.1) WILD-TYPE | 27 | 23 | 20 | 14 | 21 |
P value = 0.05 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
DEL PEAK 19(12P13.1) MUTATED | 12 | 2 | 2 | 1 | 0 |
DEL PEAK 19(12P13.1) WILD-TYPE | 35 | 23 | 14 | 15 | 18 |
P value = 0.0099 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 19(12P13.1) MUTATED | 20 | 4 | 3 |
DEL PEAK 19(12P13.1) WILD-TYPE | 63 | 44 | 43 |
P value = 0.00134 (Fisher's exact test), Q value = 0.0077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 19(12P13.1) MUTATED | 6 | 20 | 1 |
DEL PEAK 19(12P13.1) WILD-TYPE | 68 | 55 | 27 |
P value = 0.00463 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 19(12P13.1) MUTATED | 19 | 2 | 4 | 2 |
DEL PEAK 19(12P13.1) WILD-TYPE | 50 | 38 | 31 | 31 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 19(12P13.1) MUTATED | 25 | 0 | 2 |
DEL PEAK 19(12P13.1) WILD-TYPE | 77 | 42 | 31 |
P value = 0.0216 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 19(12P13.1) MUTATED | 17 | 6 | 3 |
DEL PEAK 19(12P13.1) WILD-TYPE | 52 | 61 | 34 |
P value = 0.00051 (Fisher's exact test), Q value = 0.0035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 19(12P13.1) MUTATED | 22 | 2 | 2 |
DEL PEAK 19(12P13.1) WILD-TYPE | 64 | 45 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 20(12Q12) MUTATED | 1 | 23 | 1 |
DEL PEAK 20(12Q12) WILD-TYPE | 84 | 52 | 23 |
P value = 0.00018 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 20(12Q12) MUTATED | 7 | 1 | 15 | 2 |
DEL PEAK 20(12Q12) WILD-TYPE | 38 | 46 | 35 | 39 |
P value = 0.00405 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 20(12Q12) MUTATED | 18 | 5 | 1 |
DEL PEAK 20(12Q12) WILD-TYPE | 65 | 43 | 45 |
P value = 0.00098 (Fisher's exact test), Q value = 0.0059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 20(12Q12) MUTATED | 6 | 18 | 0 |
DEL PEAK 20(12Q12) WILD-TYPE | 68 | 57 | 28 |
P value = 0.00237 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 20(12Q12) MUTATED | 18 | 3 | 2 | 1 |
DEL PEAK 20(12Q12) WILD-TYPE | 51 | 37 | 33 | 32 |
P value = 0.021 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 20(12Q12) MUTATED | 20 | 3 | 1 |
DEL PEAK 20(12Q12) WILD-TYPE | 82 | 39 | 32 |
P value = 0.00177 (Fisher's exact test), Q value = 0.0091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 20(12Q12) MUTATED | 17 | 3 | 3 |
DEL PEAK 20(12Q12) WILD-TYPE | 52 | 64 | 34 |
P value = 0.00294 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 20(12Q12) MUTATED | 17 | 6 | 0 |
DEL PEAK 20(12Q12) WILD-TYPE | 69 | 41 | 40 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 21(12Q21.33) MUTATED | 6 | 33 | 5 |
DEL PEAK 21(12Q21.33) WILD-TYPE | 79 | 42 | 19 |
P value = 0.00137 (Fisher's exact test), Q value = 0.0078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 21(12Q21.33) MUTATED | 15 | 5 | 19 | 5 |
DEL PEAK 21(12Q21.33) WILD-TYPE | 30 | 42 | 31 | 36 |
P value = 0.0127 (Fisher's exact test), Q value = 0.039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 21(12Q21.33) MUTATED | 16 | 2 | 4 | 1 | 4 |
DEL PEAK 21(12Q21.33) WILD-TYPE | 23 | 23 | 16 | 14 | 19 |
P value = 0.0206 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
DEL PEAK 21(12Q21.33) MUTATED | 15 | 2 | 2 | 1 | 7 |
DEL PEAK 21(12Q21.33) WILD-TYPE | 32 | 23 | 14 | 15 | 11 |
P value = 0.00726 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 21(12Q21.33) MUTATED | 27 | 11 | 4 |
DEL PEAK 21(12Q21.33) WILD-TYPE | 56 | 37 | 42 |
P value = 0.00179 (Fisher's exact test), Q value = 0.0092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 21(12Q21.33) MUTATED | 15 | 26 | 1 |
DEL PEAK 21(12Q21.33) WILD-TYPE | 59 | 49 | 27 |
P value = 0.00585 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 21(12Q21.33) MUTATED | 26 | 8 | 4 | 4 |
DEL PEAK 21(12Q21.33) WILD-TYPE | 43 | 32 | 31 | 29 |
P value = 0.00621 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 21(12Q21.33) MUTATED | 33 | 6 | 3 |
DEL PEAK 21(12Q21.33) WILD-TYPE | 69 | 36 | 30 |
P value = 0.00339 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 21(12Q21.33) MUTATED | 25 | 8 | 8 |
DEL PEAK 21(12Q21.33) WILD-TYPE | 44 | 59 | 29 |
P value = 0.00141 (Fisher's exact test), Q value = 0.0079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 21(12Q21.33) MUTATED | 28 | 11 | 2 |
DEL PEAK 21(12Q21.33) WILD-TYPE | 58 | 36 | 38 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 22(12Q24.33) MUTATED | 7 | 30 | 6 |
DEL PEAK 22(12Q24.33) WILD-TYPE | 78 | 45 | 18 |
P value = 0.00209 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 22(12Q24.33) MUTATED | 14 | 5 | 19 | 5 |
DEL PEAK 22(12Q24.33) WILD-TYPE | 31 | 42 | 31 | 36 |
P value = 0.0141 (Fisher's exact test), Q value = 0.042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 22(12Q24.33) MUTATED | 15 | 3 | 4 | 0 | 4 |
DEL PEAK 22(12Q24.33) WILD-TYPE | 24 | 22 | 16 | 15 | 19 |
P value = 0.0144 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
DEL PEAK 22(12Q24.33) MUTATED | 14 | 3 | 2 | 0 | 7 |
DEL PEAK 22(12Q24.33) WILD-TYPE | 33 | 22 | 14 | 16 | 11 |
P value = 0.00126 (Fisher's exact test), Q value = 0.0073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 22(12Q24.33) MUTATED | 28 | 10 | 3 |
DEL PEAK 22(12Q24.33) WILD-TYPE | 55 | 38 | 43 |
P value = 0.00333 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 22(12Q24.33) MUTATED | 15 | 25 | 1 |
DEL PEAK 22(12Q24.33) WILD-TYPE | 59 | 50 | 27 |
P value = 0.00334 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 22(12Q24.33) MUTATED | 26 | 7 | 5 | 3 |
DEL PEAK 22(12Q24.33) WILD-TYPE | 43 | 33 | 30 | 30 |
P value = 0.00059 (Fisher's exact test), Q value = 0.0039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 22(12Q24.33) MUTATED | 34 | 5 | 2 |
DEL PEAK 22(12Q24.33) WILD-TYPE | 68 | 37 | 31 |
P value = 0.00673 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 22(12Q24.33) MUTATED | 24 | 8 | 8 |
DEL PEAK 22(12Q24.33) WILD-TYPE | 45 | 59 | 29 |
P value = 0.00017 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 22(12Q24.33) MUTATED | 29 | 10 | 1 |
DEL PEAK 22(12Q24.33) WILD-TYPE | 57 | 37 | 39 |
P value = 0.0031 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 23(13Q14.2) MUTATED | 3 | 11 | 6 |
DEL PEAK 23(13Q14.2) WILD-TYPE | 82 | 64 | 18 |
P value = 0.00196 (Fisher's exact test), Q value = 0.0099
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 23(13Q14.2) MUTATED | 12 | 1 | 6 |
DEL PEAK 23(13Q14.2) WILD-TYPE | 57 | 66 | 31 |
P value = 0.00371 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 24(14Q11.2) MUTATED | 5 | 15 | 0 |
DEL PEAK 24(14Q11.2) WILD-TYPE | 80 | 60 | 24 |
P value = 0.00825 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 24(14Q11.2) MUTATED | 10 | 1 | 7 | 2 |
DEL PEAK 24(14Q11.2) WILD-TYPE | 35 | 46 | 43 | 39 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 25(15Q15.1) MUTATED | 3 | 21 | 12 |
DEL PEAK 25(15Q15.1) WILD-TYPE | 82 | 54 | 12 |
P value = 0.0103 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 25(15Q15.1) MUTATED | 9 | 4 | 17 | 5 |
DEL PEAK 25(15Q15.1) WILD-TYPE | 36 | 43 | 33 | 36 |
P value = 0.0457 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 25(15Q15.1) MUTATED | 23 | 7 | 5 |
DEL PEAK 25(15Q15.1) WILD-TYPE | 60 | 41 | 41 |
P value = 0.00328 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 25(15Q15.1) MUTATED | 11 | 23 | 1 |
DEL PEAK 25(15Q15.1) WILD-TYPE | 63 | 52 | 27 |
P value = 0.0335 (Fisher's exact test), Q value = 0.085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 25(15Q15.1) MUTATED | 27 | 5 | 3 |
DEL PEAK 25(15Q15.1) WILD-TYPE | 75 | 37 | 30 |
P value = 0.00571 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 25(15Q15.1) MUTATED | 24 | 7 | 2 |
DEL PEAK 25(15Q15.1) WILD-TYPE | 62 | 40 | 38 |
P value = 0.0153 (Fisher's exact test), Q value = 0.045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 26(16Q23.1) MUTATED | 6 | 6 | 7 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 79 | 69 | 17 |
P value = 0.00645 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
DEL PEAK 26(16Q23.1) MUTATED | 1 | 0 | 1 | 4 | 0 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 46 | 25 | 15 | 12 | 18 |
P value = 0.0476 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 26(16Q23.1) MUTATED | 3 | 12 | 3 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 71 | 63 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 27(17P12) MUTATED | 12 | 66 | 11 |
DEL PEAK 27(17P12) WILD-TYPE | 73 | 9 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 27(17P12) MUTATED | 29 | 8 | 40 | 12 |
DEL PEAK 27(17P12) WILD-TYPE | 16 | 39 | 10 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 27(17P12) MUTATED | 54 | 24 | 8 |
DEL PEAK 27(17P12) WILD-TYPE | 29 | 24 | 38 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 27(17P12) MUTATED | 40 | 43 | 3 |
DEL PEAK 27(17P12) WILD-TYPE | 34 | 32 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 27(17P12) MUTATED | 50 | 18 | 11 | 7 |
DEL PEAK 27(17P12) WILD-TYPE | 19 | 22 | 24 | 26 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 27(17P12) MUTATED | 63 | 16 | 7 |
DEL PEAK 27(17P12) WILD-TYPE | 39 | 26 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 27(17P12) MUTATED | 50 | 17 | 18 |
DEL PEAK 27(17P12) WILD-TYPE | 19 | 50 | 19 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 27(17P12) MUTATED | 54 | 24 | 7 |
DEL PEAK 27(17P12) WILD-TYPE | 32 | 23 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 28(17Q22) MUTATED | 4 | 40 | 5 |
DEL PEAK 28(17Q22) WILD-TYPE | 81 | 35 | 19 |
P value = 0.00163 (Fisher's exact test), Q value = 0.0086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 28(17Q22) MUTATED | 17 | 6 | 20 | 6 |
DEL PEAK 28(17Q22) WILD-TYPE | 28 | 41 | 30 | 35 |
P value = 0.00395 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 28(17Q22) MUTATED | 19 | 5 | 1 | 3 | 8 |
DEL PEAK 28(17Q22) WILD-TYPE | 20 | 20 | 19 | 12 | 15 |
P value = 0.00999 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 28(17Q22) MUTATED | 29 | 13 | 5 |
DEL PEAK 28(17Q22) WILD-TYPE | 54 | 35 | 41 |
P value = 0.0136 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 28(17Q22) MUTATED | 19 | 26 | 2 |
DEL PEAK 28(17Q22) WILD-TYPE | 55 | 49 | 26 |
P value = 0.0086 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 28(17Q22) MUTATED | 28 | 8 | 7 | 4 |
DEL PEAK 28(17Q22) WILD-TYPE | 41 | 32 | 28 | 29 |
P value = 0.0258 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 28(17Q22) MUTATED | 35 | 7 | 5 |
DEL PEAK 28(17Q22) WILD-TYPE | 67 | 35 | 28 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 28(17Q22) MUTATED | 31 | 7 | 8 |
DEL PEAK 28(17Q22) WILD-TYPE | 38 | 60 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 30(18Q21.2) MUTATED | 41 | 70 | 15 |
DEL PEAK 30(18Q21.2) WILD-TYPE | 44 | 5 | 9 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 30(18Q21.2) MUTATED | 37 | 19 | 45 | 24 |
DEL PEAK 30(18Q21.2) WILD-TYPE | 8 | 28 | 5 | 17 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 30(18Q21.2) MUTATED | 67 | 34 | 19 |
DEL PEAK 30(18Q21.2) WILD-TYPE | 16 | 14 | 27 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 30(18Q21.2) MUTATED | 51 | 60 | 9 |
DEL PEAK 30(18Q21.2) WILD-TYPE | 23 | 15 | 19 |
P value = 0.00018 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 30(18Q21.2) MUTATED | 59 | 26 | 19 | 16 |
DEL PEAK 30(18Q21.2) WILD-TYPE | 10 | 14 | 16 | 17 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 30(18Q21.2) MUTATED | 82 | 25 | 13 |
DEL PEAK 30(18Q21.2) WILD-TYPE | 20 | 17 | 20 |
P value = 0.00998 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 30(18Q21.2) MUTATED | 55 | 37 | 25 |
DEL PEAK 30(18Q21.2) WILD-TYPE | 14 | 30 | 12 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 30(18Q21.2) MUTATED | 69 | 37 | 11 |
DEL PEAK 30(18Q21.2) WILD-TYPE | 17 | 10 | 29 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 31(19P13.3) MUTATED | 4 | 25 | 7 |
DEL PEAK 31(19P13.3) WILD-TYPE | 81 | 50 | 17 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 31(19P13.3) MUTATED | 11 | 1 | 19 | 5 |
DEL PEAK 31(19P13.3) WILD-TYPE | 34 | 46 | 31 | 36 |
P value = 0.00175 (Fisher's exact test), Q value = 0.0091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 31(19P13.3) MUTATED | 11 | 24 | 1 |
DEL PEAK 31(19P13.3) WILD-TYPE | 63 | 51 | 27 |
P value = 0.0086 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 31(19P13.3) MUTATED | 29 | 4 | 3 |
DEL PEAK 31(19P13.3) WILD-TYPE | 73 | 38 | 30 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 31(19P13.3) MUTATED | 25 | 4 | 6 |
DEL PEAK 31(19P13.3) WILD-TYPE | 44 | 63 | 31 |
P value = 0.00411 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 31(19P13.3) MUTATED | 25 | 8 | 2 |
DEL PEAK 31(19P13.3) WILD-TYPE | 61 | 39 | 38 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 32(19P13.2) MUTATED | 2 | 19 | 7 |
DEL PEAK 32(19P13.2) WILD-TYPE | 83 | 56 | 17 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 32(19P13.2) MUTATED | 8 | 1 | 17 | 2 |
DEL PEAK 32(19P13.2) WILD-TYPE | 37 | 46 | 33 | 39 |
P value = 0.00623 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 32(19P13.2) MUTATED | 20 | 5 | 2 |
DEL PEAK 32(19P13.2) WILD-TYPE | 63 | 43 | 44 |
P value = 0.00359 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 32(19P13.2) MUTATED | 9 | 18 | 0 |
DEL PEAK 32(19P13.2) WILD-TYPE | 65 | 57 | 28 |
P value = 0.00046 (Fisher's exact test), Q value = 0.0032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 32(19P13.2) MUTATED | 24 | 3 | 0 |
DEL PEAK 32(19P13.2) WILD-TYPE | 78 | 39 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 32(19P13.2) MUTATED | 21 | 1 | 4 |
DEL PEAK 32(19P13.2) WILD-TYPE | 48 | 66 | 33 |
P value = 0.00076 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 32(19P13.2) MUTATED | 20 | 6 | 0 |
DEL PEAK 32(19P13.2) WILD-TYPE | 66 | 41 | 40 |
P value = 0.0025 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 33(19Q13.33) MUTATED | 3 | 14 | 5 |
DEL PEAK 33(19Q13.33) WILD-TYPE | 82 | 61 | 19 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 34(21Q11.2) MUTATED | 12 | 40 | 10 |
DEL PEAK 34(21Q11.2) WILD-TYPE | 73 | 35 | 14 |
P value = 0.0106 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 34(21Q11.2) MUTATED | 18 | 10 | 24 | 9 |
DEL PEAK 34(21Q11.2) WILD-TYPE | 27 | 37 | 26 | 32 |
P value = 0.00925 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 34(21Q11.2) MUTATED | 33 | 18 | 7 |
DEL PEAK 34(21Q11.2) WILD-TYPE | 50 | 30 | 39 |
P value = 0.0218 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 34(21Q11.2) MUTATED | 41 | 12 | 5 |
DEL PEAK 34(21Q11.2) WILD-TYPE | 61 | 30 | 28 |
P value = 0.00033 (Fisher's exact test), Q value = 0.0024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 34(21Q11.2) MUTATED | 33 | 11 | 12 |
DEL PEAK 34(21Q11.2) WILD-TYPE | 36 | 56 | 25 |
P value = 0.0187 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 34(21Q11.2) MUTATED | 31 | 19 | 6 |
DEL PEAK 34(21Q11.2) WILD-TYPE | 55 | 28 | 34 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 35(22Q13.31) MUTATED | 8 | 40 | 12 |
DEL PEAK 35(22Q13.31) WILD-TYPE | 77 | 35 | 12 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 35(22Q13.31) MUTATED | 20 | 8 | 26 | 6 |
DEL PEAK 35(22Q13.31) WILD-TYPE | 25 | 39 | 24 | 35 |
P value = 0.0133 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 35(22Q13.31) MUTATED | 32 | 18 | 7 |
DEL PEAK 35(22Q13.31) WILD-TYPE | 51 | 30 | 39 |
P value = 0.0405 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 35(22Q13.31) MUTATED | 30 | 13 | 8 | 6 |
DEL PEAK 35(22Q13.31) WILD-TYPE | 39 | 27 | 27 | 27 |
P value = 0.0168 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 35(22Q13.31) MUTATED | 41 | 11 | 5 |
DEL PEAK 35(22Q13.31) WILD-TYPE | 61 | 31 | 28 |
P value = 9e-05 (Fisher's exact test), Q value = 0.00079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 35(22Q13.31) MUTATED | 29 | 9 | 18 |
DEL PEAK 35(22Q13.31) WILD-TYPE | 40 | 58 | 19 |
P value = 0.00108 (Fisher's exact test), Q value = 0.0064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 35(22Q13.31) MUTATED | 35 | 17 | 4 |
DEL PEAK 35(22Q13.31) WILD-TYPE | 51 | 30 | 36 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 36(22Q13.32) MUTATED | 9 | 40 | 13 |
DEL PEAK 36(22Q13.32) WILD-TYPE | 76 | 35 | 11 |
P value = 0.00021 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 36(22Q13.32) MUTATED | 21 | 10 | 25 | 6 |
DEL PEAK 36(22Q13.32) WILD-TYPE | 24 | 37 | 25 | 35 |
P value = 0.00051 (Fisher's exact test), Q value = 0.0035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 36(22Q13.32) MUTATED | 29 | 11 | 18 |
DEL PEAK 36(22Q13.32) WILD-TYPE | 40 | 56 | 19 |
P value = 0.0447 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 36(22Q13.32) MUTATED | 33 | 18 | 7 |
DEL PEAK 36(22Q13.32) WILD-TYPE | 53 | 29 | 33 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 37(XP21.1) MUTATED | 3 | 18 | 8 |
DEL PEAK 37(XP21.1) WILD-TYPE | 82 | 57 | 16 |
P value = 0.0472 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 37(XP21.1) MUTATED | 8 | 0 | 1 | 2 | 5 |
DEL PEAK 37(XP21.1) WILD-TYPE | 31 | 25 | 19 | 13 | 18 |
P value = 0.0149 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 37(XP21.1) MUTATED | 15 | 4 | 8 |
DEL PEAK 37(XP21.1) WILD-TYPE | 54 | 63 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 85 | 75 | 24 |
DEL PEAK 38(XQ11.2) MUTATED | 0 | 16 | 7 |
DEL PEAK 38(XQ11.2) WILD-TYPE | 85 | 59 | 17 |
P value = 0.00271 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 47 | 50 | 41 |
DEL PEAK 38(XQ11.2) MUTATED | 8 | 4 | 11 | 0 |
DEL PEAK 38(XQ11.2) WILD-TYPE | 37 | 43 | 39 | 41 |
P value = 0.00163 (Fisher's exact test), Q value = 0.0086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 38(XQ11.2) MUTATED | 10 | 0 | 0 | 0 | 3 |
DEL PEAK 38(XQ11.2) WILD-TYPE | 29 | 25 | 20 | 15 | 20 |
P value = 0.00894 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 83 | 48 | 46 |
DEL PEAK 38(XQ11.2) MUTATED | 16 | 4 | 1 |
DEL PEAK 38(XQ11.2) WILD-TYPE | 67 | 44 | 45 |
P value = 0.0206 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 38(XQ11.2) MUTATED | 5 | 15 | 1 |
DEL PEAK 38(XQ11.2) WILD-TYPE | 69 | 60 | 27 |
P value = 0.0043 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 69 | 40 | 35 | 33 |
DEL PEAK 38(XQ11.2) MUTATED | 16 | 2 | 2 | 1 |
DEL PEAK 38(XQ11.2) WILD-TYPE | 53 | 38 | 33 | 32 |
P value = 0.0234 (Fisher's exact test), Q value = 0.062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 38(XQ11.2) MUTATED | 18 | 2 | 1 |
DEL PEAK 38(XQ11.2) WILD-TYPE | 84 | 40 | 32 |
P value = 0.00447 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 67 | 37 |
DEL PEAK 38(XQ11.2) MUTATED | 14 | 2 | 4 |
DEL PEAK 38(XQ11.2) WILD-TYPE | 55 | 65 | 33 |
P value = 0.016 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 86 | 47 | 40 |
DEL PEAK 38(XQ11.2) MUTATED | 16 | 3 | 1 |
DEL PEAK 38(XQ11.2) WILD-TYPE | 70 | 44 | 39 |
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Copy number data file = all_lesions.txt from GISTIC pipeline
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Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/PAAD-TP/19783030/transformed.cor.cli.txt
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Molecular subtype file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/PAAD-TP/20139891/PAAD-TP.transferedmergedcluster.txt
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Number of patients = 184
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Number of significantly focal cnvs = 63
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Number of molecular subtypes = 10
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Exclude genes that fewer than K tumors have alterations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.