This pipeline computes the correlation between significant arm-level copy number variations (cnvs) and molecular subtypes.
Testing the association between copy number variation 82 arm-level events and 10 molecular subtypes across 90 patients, 244 significant findings detected with P value < 0.05 and Q value < 0.25.
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1q gain cnv correlated to 'MRNASEQ_CNMF'.
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2p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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2q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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3q gain cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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4p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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4q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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5p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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5q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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6p gain cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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6q gain cnv correlated to 'CN_CNMF'.
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7p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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7q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8p gain cnv correlated to 'CN_CNMF' and 'MIRSEQ_MATURE_CNMF'.
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8q gain cnv correlated to 'CN_CNMF'.
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9p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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9q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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10p gain cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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10q gain cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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11q gain cnv correlated to 'CN_CNMF' and 'MRNASEQ_CNMF'.
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12p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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12q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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13q gain cnv correlated to 'MRNASEQ_CNMF'.
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14q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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15q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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16p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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16q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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17q gain cnv correlated to 'CN_CNMF'.
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19p gain cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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19q gain cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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20p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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20q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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21q gain cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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xp gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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xq gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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1p loss cnv correlated to 'CN_CNMF'.
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1q loss cnv correlated to 'CN_CNMF' and 'RPPA_CHIERARCHICAL'.
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2p loss cnv correlated to 'CN_CNMF' and 'MIRSEQ_CNMF'.
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2q loss cnv correlated to 'CN_CNMF' and 'MIRSEQ_CNMF'.
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3p loss cnv correlated to 'CN_CNMF'.
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3q loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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4p loss cnv correlated to 'MRNASEQ_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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4q loss cnv correlated to 'MRNASEQ_CNMF'.
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5p loss cnv correlated to 'MRNASEQ_CHIERARCHICAL'.
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5q loss cnv correlated to 'MIRSEQ_CNMF'.
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6p loss cnv correlated to 'CN_CNMF'.
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6q loss cnv correlated to 'CN_CNMF'.
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7q loss cnv correlated to 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8p loss cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8q loss cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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9p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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9q loss cnv correlated to 'CN_CNMF'.
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11p loss cnv correlated to 'CN_CNMF'.
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11q loss cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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12p loss cnv correlated to 'MRNASEQ_CHIERARCHICAL'.
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12q loss cnv correlated to 'MRNASEQ_CHIERARCHICAL' and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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13q loss cnv correlated to 'CN_CNMF'.
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14q loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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15q loss cnv correlated to 'CN_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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16p loss cnv correlated to 'MRNASEQ_CNMF'.
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17p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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17q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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18p loss cnv correlated to 'CN_CNMF'.
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18q loss cnv correlated to 'CN_CNMF'.
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19p loss cnv correlated to 'MRNASEQ_CHIERARCHICAL' and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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19q loss cnv correlated to 'CN_CNMF' and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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21q loss cnv correlated to 'CN_CNMF'.
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22q loss cnv correlated to 'CN_CNMF'.
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xp loss cnv correlated to 'CN_CNMF'.
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xq loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
2q gain | 13 (14%) | 77 |
0.00322 (0.0264) |
0.011 (0.0662) |
0.828 (0.958) |
0.00552 (0.0374) |
0.00377 (0.0294) |
0.00098 (0.01) |
0.0389 (0.142) |
0.0011 (0.0106) |
0.0137 (0.0731) |
9e-05 (0.00176) |
20p gain | 46 (51%) | 44 |
2e-05 (0.000607) |
0.00032 (0.0041) |
0.0416 (0.147) |
0.00852 (0.055) |
0.00025 (0.00347) |
7e-05 (0.00155) |
0.00218 (0.019) |
0.0886 (0.233) |
0.00538 (0.0368) |
0.00533 (0.0368) |
14q gain | 21 (23%) | 69 |
0.00347 (0.0276) |
0.0197 (0.0923) |
0.141 (0.32) |
0.427 (0.639) |
0.00029 (0.00377) |
0.00105 (0.0104) |
0.00022 (0.00322) |
0.00019 (0.00289) |
2e-05 (0.000607) |
2e-05 (0.000607) |
20q gain | 49 (54%) | 41 |
3e-05 (0.00082) |
0.00018 (0.00278) |
0.0113 (0.0662) |
0.0756 (0.218) |
0.00015 (0.00251) |
0.00027 (0.00363) |
0.00355 (0.028) |
0.273 (0.473) |
0.0131 (0.0731) |
0.0454 (0.158) |
2p gain | 13 (14%) | 77 |
0.00273 (0.0233) |
0.00702 (0.0461) |
0.572 (0.766) |
0.342 (0.555) |
0.013 (0.0728) |
0.00025 (0.00347) |
0.0722 (0.21) |
0.019 (0.0899) |
0.0329 (0.13) |
0.0113 (0.0662) |
15q gain | 11 (12%) | 79 |
0.0141 (0.0739) |
0.029 (0.121) |
0.371 (0.588) |
0.846 (0.97) |
0.00971 (0.0608) |
0.00495 (0.0353) |
0.184 (0.376) |
0.0007 (0.00765) |
0.0165 (0.0821) |
0.0429 (0.151) |
17p loss | 33 (37%) | 57 |
0.00024 (0.00345) |
0.00256 (0.0221) |
0.456 (0.661) |
0.195 (0.389) |
0.004 (0.0301) |
0.0152 (0.0767) |
0.0875 (0.231) |
0.00094 (0.00988) |
0.0318 (0.127) |
0.0005 (0.00612) |
4q gain | 35 (39%) | 55 |
7e-05 (0.00155) |
0.00445 (0.0323) |
1 (1.00) |
0.532 (0.721) |
0.00012 (0.00209) |
3e-05 (0.00082) |
0.8 (0.939) |
0.00028 (0.0037) |
0.379 (0.597) |
0.0248 (0.106) |
5p gain | 57 (63%) | 33 |
4e-05 (0.00102) |
0.00345 (0.0276) |
0.0642 (0.195) |
0.0343 (0.133) |
0.00053 (0.0063) |
1e-05 (0.000456) |
0.135 (0.31) |
0.226 (0.424) |
0.00305 (0.0255) |
0.159 (0.341) |
5q gain | 55 (61%) | 35 |
1e-05 (0.000456) |
0.00037 (0.00467) |
0.19 (0.386) |
0.0662 (0.197) |
0.00018 (0.00278) |
1e-05 (0.000456) |
0.0382 (0.142) |
0.0822 (0.221) |
0.0101 (0.0631) |
0.0904 (0.235) |
7q gain | 48 (53%) | 42 |
0.00017 (0.00273) |
0.00889 (0.0565) |
0.0817 (0.22) |
0.242 (0.442) |
1e-05 (0.000456) |
0.00012 (0.00209) |
1 (1.00) |
0.332 (0.541) |
0.0149 (0.0764) |
0.0218 (0.0984) |
9p gain | 21 (23%) | 69 |
1e-05 (0.000456) |
0.0116 (0.0667) |
0.0483 (0.163) |
0.121 (0.286) |
0.017 (0.0831) |
0.0137 (0.0731) |
0.0788 (0.219) |
0.436 (0.643) |
0.028 (0.119) |
0.144 (0.323) |
9q gain | 27 (30%) | 63 |
2e-05 (0.000607) |
0.00434 (0.0321) |
0.0836 (0.223) |
0.21 (0.405) |
0.0355 (0.136) |
0.00534 (0.0368) |
0.019 (0.0899) |
0.212 (0.405) |
0.0146 (0.0753) |
0.207 (0.404) |
10p gain | 25 (28%) | 65 |
2e-05 (0.000607) |
0.0895 (0.234) |
0.0217 (0.0984) |
0.0134 (0.0731) |
1e-05 (0.000456) |
0.00016 (0.00262) |
0.0535 (0.176) |
0.506 (0.702) |
0.021 (0.0963) |
0.548 (0.738) |
10q gain | 26 (29%) | 64 |
1e-05 (0.000456) |
0.288 (0.491) |
0.0565 (0.18) |
0.0145 (0.0753) |
2e-05 (0.000607) |
0.00042 (0.00522) |
0.0311 (0.125) |
0.343 (0.555) |
0.0285 (0.119) |
0.395 (0.613) |
16p gain | 50 (56%) | 40 |
1e-05 (0.000456) |
2e-05 (0.000607) |
1 (1.00) |
0.0637 (0.194) |
5e-05 (0.00124) |
1e-05 (0.000456) |
0.114 (0.28) |
0.0205 (0.0943) |
0.0112 (0.0662) |
0.0774 (0.219) |
16q gain | 47 (52%) | 43 |
1e-05 (0.000456) |
1e-05 (0.000456) |
1 (1.00) |
0.323 (0.53) |
9e-05 (0.00176) |
1e-05 (0.000456) |
0.0552 (0.179) |
0.0137 (0.0731) |
0.00052 (0.00627) |
0.0648 (0.195) |
21q gain | 31 (34%) | 59 |
0.254 (0.452) |
0.00424 (0.0316) |
0.0782 (0.219) |
0.231 (0.43) |
0.033 (0.13) |
0.00102 (0.0102) |
0.0224 (0.0999) |
0.02 (0.0929) |
0.0188 (0.0899) |
0.087 (0.23) |
xp gain | 43 (48%) | 47 |
1e-05 (0.000456) |
0.0297 (0.122) |
0.431 (0.64) |
0.0235 (0.102) |
0.00288 (0.0243) |
0.0155 (0.0773) |
1 (1.00) |
0.0613 (0.19) |
0.313 (0.517) |
0.00859 (0.055) |
xq gain | 41 (46%) | 49 |
8e-05 (0.00164) |
0.00514 (0.0363) |
0.195 (0.389) |
0.0329 (0.13) |
0.00439 (0.0321) |
0.024 (0.104) |
0.883 (1.00) |
0.103 (0.26) |
0.347 (0.56) |
0.0301 (0.122) |
9p loss | 20 (22%) | 70 |
1e-05 (0.000456) |
0.0119 (0.0679) |
0.618 (0.805) |
0.117 (0.282) |
8e-05 (0.00164) |
0.00097 (0.01) |
0.0402 (0.144) |
0.139 (0.318) |
0.00308 (0.0255) |
0.248 (0.448) |
4p gain | 38 (42%) | 52 |
4e-05 (0.00102) |
0.00728 (0.0474) |
0.977 (1.00) |
0.43 (0.64) |
2e-05 (0.000607) |
1e-05 (0.000456) |
0.739 (0.89) |
0.00153 (0.0138) |
0.0585 (0.184) |
0.128 (0.298) |
7p gain | 48 (53%) | 42 |
0.0001 (0.00186) |
0.046 (0.158) |
0.0811 (0.22) |
0.0928 (0.24) |
8e-05 (0.00164) |
0.00136 (0.0124) |
1 (1.00) |
0.548 (0.738) |
0.0152 (0.0767) |
0.0813 (0.22) |
12p gain | 64 (71%) | 26 |
1e-05 (0.000456) |
0.0133 (0.0731) |
0.372 (0.588) |
0.0672 (0.2) |
0.00011 (0.002) |
6e-05 (0.00141) |
0.133 (0.307) |
0.21 (0.405) |
0.0409 (0.145) |
0.117 (0.282) |
12q gain | 64 (71%) | 26 |
1e-05 (0.000456) |
0.0227 (0.101) |
0.342 (0.555) |
0.028 (0.119) |
0.00058 (0.00661) |
0.00013 (0.00222) |
0.144 (0.323) |
0.455 (0.66) |
0.092 (0.239) |
0.392 (0.612) |
3q loss | 19 (21%) | 71 |
0.00107 (0.0104) |
0.154 (0.335) |
0.451 (0.657) |
0.602 (0.793) |
0.0137 (0.0731) |
0.0293 (0.121) |
0.0581 (0.184) |
0.34 (0.553) |
0.00673 (0.0445) |
0.0385 (0.142) |
8q loss | 12 (13%) | 78 |
0.0135 (0.0731) |
0.128 (0.298) |
0.407 (0.619) |
0.0357 (0.136) |
0.0246 (0.106) |
0.128 (0.298) |
0.0798 (0.22) |
0.0352 (0.136) |
0.0265 (0.113) |
0.0744 (0.215) |
17q loss | 25 (28%) | 65 |
0.0116 (0.0667) |
0.0122 (0.0688) |
0.583 (0.774) |
0.515 (0.71) |
0.0636 (0.194) |
0.047 (0.16) |
0.152 (0.332) |
0.00895 (0.0565) |
0.26 (0.458) |
0.0454 (0.158) |
xq loss | 16 (18%) | 74 |
0.0373 (0.14) |
0.0173 (0.0838) |
0.0166 (0.0822) |
0.0595 (0.186) |
0.0347 (0.134) |
0.0361 (0.137) |
0.355 (0.568) |
0.15 (0.328) |
0.277 (0.477) |
0.231 (0.43) |
19p gain | 56 (62%) | 34 |
3e-05 (0.00082) |
0.184 (0.376) |
0.108 (0.269) |
0.0191 (0.0899) |
0.00101 (0.0102) |
0.00054 (0.00633) |
0.429 (0.639) |
0.467 (0.667) |
0.0891 (0.233) |
0.703 (0.862) |
8p loss | 16 (18%) | 74 |
0.0394 (0.143) |
0.063 (0.194) |
0.0699 (0.204) |
0.00058 (0.00661) |
0.139 (0.318) |
0.141 (0.32) |
0.0658 (0.197) |
0.023 (0.102) |
0.055 (0.179) |
0.0108 (0.0662) |
6p gain | 18 (20%) | 72 |
0.048 (0.163) |
0.504 (0.701) |
0.689 (0.854) |
0.872 (0.994) |
0.0393 (0.143) |
0.474 (0.671) |
0.245 (0.446) |
0.0553 (0.179) |
0.0224 (0.0999) |
0.162 (0.347) |
19q gain | 52 (58%) | 38 |
1e-05 (0.000456) |
0.251 (0.45) |
0.664 (0.836) |
0.0557 (0.179) |
0.00027 (0.00363) |
0.00115 (0.0108) |
0.289 (0.491) |
0.11 (0.272) |
0.141 (0.32) |
0.373 (0.588) |
14q loss | 18 (20%) | 72 |
0.00077 (0.0082) |
0.4 (0.613) |
0.332 (0.541) |
0.0527 (0.174) |
0.0153 (0.0769) |
0.0461 (0.158) |
0.473 (0.671) |
0.53 (0.721) |
0.565 (0.758) |
0.98 (1.00) |
15q loss | 21 (23%) | 69 |
0.00074 (0.00798) |
0.867 (0.99) |
0.661 (0.834) |
0.509 (0.704) |
0.115 (0.28) |
0.23 (0.43) |
0.839 (0.967) |
0.0404 (0.144) |
0.732 (0.884) |
0.0484 (0.163) |
3q gain | 16 (18%) | 74 |
0.046 (0.158) |
0.0114 (0.0662) |
0.442 (0.647) |
0.822 (0.958) |
0.0766 (0.219) |
0.795 (0.935) |
0.627 (0.811) |
0.246 (0.446) |
0.149 (0.328) |
0.352 (0.565) |
8p gain | 32 (36%) | 58 |
0.0033 (0.0268) |
0.281 (0.484) |
0.521 (0.713) |
0.437 (0.643) |
0.17 (0.36) |
0.146 (0.326) |
0.0775 (0.219) |
0.172 (0.362) |
0.0234 (0.102) |
0.192 (0.387) |
11q gain | 6 (7%) | 84 |
0.0301 (0.122) |
0.259 (0.458) |
0.2 (0.395) |
0.483 (0.679) |
0.0399 (0.143) |
0.0787 (0.219) |
0.457 (0.661) |
0.369 (0.588) |
0.204 (0.4) |
0.0811 (0.22) |
1q loss | 21 (23%) | 69 |
2e-05 (0.000607) |
0.921 (1.00) |
0.771 (0.916) |
0.0109 (0.0662) |
0.807 (0.944) |
0.464 (0.666) |
0.468 (0.667) |
0.722 (0.877) |
0.512 (0.707) |
0.529 (0.721) |
2p loss | 16 (18%) | 74 |
0.00205 (0.0181) |
0.288 (0.491) |
0.859 (0.982) |
0.658 (0.833) |
0.724 (0.877) |
0.301 (0.504) |
0.0358 (0.136) |
0.639 (0.818) |
0.25 (0.45) |
0.518 (0.711) |
2q loss | 14 (16%) | 76 |
0.00115 (0.0108) |
0.145 (0.323) |
0.77 (0.916) |
0.885 (1.00) |
0.19 (0.386) |
0.0686 (0.202) |
0.0337 (0.132) |
0.648 (0.823) |
0.12 (0.286) |
0.578 (0.771) |
4p loss | 9 (10%) | 81 |
0.0783 (0.219) |
0.216 (0.411) |
0.764 (0.913) |
0.898 (1.00) |
0.00397 (0.0301) |
0.014 (0.0739) |
0.373 (0.588) |
0.705 (0.863) |
0.057 (0.181) |
0.452 (0.658) |
11q loss | 22 (24%) | 68 |
0.00172 (0.0153) |
0.0113 (0.0662) |
0.758 (0.908) |
0.395 (0.613) |
0.195 (0.389) |
0.149 (0.328) |
0.174 (0.364) |
0.766 (0.913) |
0.256 (0.454) |
0.577 (0.77) |
12q loss | 4 (4%) | 86 |
0.407 (0.619) |
0.0508 (0.17) |
0.263 (0.459) |
0.0828 (0.221) |
0.408 (0.619) |
0.0103 (0.0637) |
0.148 (0.328) |
0.241 (0.441) |
0.151 (0.328) |
0.0198 (0.0923) |
19p loss | 5 (6%) | 85 |
0.149 (0.328) |
0.416 (0.626) |
0.108 (0.269) |
0.0138 (0.0732) |
0.395 (0.613) |
0.716 (0.871) |
0.255 (0.454) |
0.0294 (0.121) |
||
19q loss | 4 (4%) | 86 |
0.0445 (0.156) |
0.587 (0.777) |
0.773 (0.917) |
0.117 (0.282) |
0.395 (0.613) |
0.207 (0.404) |
0.254 (0.452) |
0.0308 (0.124) |
||
1q gain | 8 (9%) | 82 |
0.223 (0.42) |
0.524 (0.717) |
0.285 (0.488) |
0.564 (0.758) |
0.0479 (0.163) |
0.0776 (0.219) |
0.21 (0.405) |
0.241 (0.441) |
0.161 (0.346) |
0.0932 (0.24) |
6q gain | 16 (18%) | 74 |
6e-05 (0.00141) |
0.915 (1.00) |
0.66 (0.834) |
0.688 (0.854) |
0.148 (0.328) |
0.293 (0.494) |
0.177 (0.367) |
0.196 (0.39) |
0.236 (0.435) |
0.489 (0.684) |
8q gain | 38 (42%) | 52 |
0.00616 (0.0414) |
0.323 (0.53) |
0.429 (0.639) |
0.468 (0.667) |
0.32 (0.528) |
0.231 (0.43) |
0.421 (0.631) |
0.263 (0.459) |
0.213 (0.406) |
0.174 (0.364) |
13q gain | 6 (7%) | 84 |
0.894 (1.00) |
0.323 (0.53) |
0.699 (0.858) |
0.724 (0.877) |
0.0284 (0.119) |
0.634 (0.815) |
0.21 (0.405) |
0.913 (1.00) |
0.0557 (0.179) |
0.646 (0.821) |
17q gain | 7 (8%) | 83 |
0.00629 (0.0419) |
0.438 (0.643) |
0.684 (0.854) |
0.145 (0.323) |
0.292 (0.494) |
0.793 (0.934) |
0.608 (0.798) |
0.669 (0.84) |
||
1p loss | 29 (32%) | 61 |
0.00022 (0.00322) |
0.184 (0.376) |
0.904 (1.00) |
0.131 (0.303) |
0.407 (0.619) |
0.0647 (0.195) |
0.689 (0.854) |
0.409 (0.619) |
0.266 (0.463) |
0.247 (0.446) |
3p loss | 19 (21%) | 71 |
0.00521 (0.0365) |
0.495 (0.691) |
0.17 (0.361) |
0.292 (0.494) |
0.0809 (0.22) |
0.135 (0.31) |
0.226 (0.424) |
0.391 (0.612) |
0.116 (0.282) |
0.122 (0.287) |
4q loss | 10 (11%) | 80 |
0.0781 (0.219) |
0.0794 (0.219) |
0.455 (0.66) |
0.619 (0.806) |
0.0177 (0.0854) |
0.0809 (0.22) |
0.37 (0.588) |
0.397 (0.613) |
0.433 (0.642) |
0.4 (0.613) |
5p loss | 7 (8%) | 83 |
0.4 (0.613) |
0.373 (0.588) |
0.15 (0.328) |
0.191 (0.386) |
0.41 (0.619) |
0.0218 (0.0984) |
0.766 (0.913) |
0.156 (0.336) |
0.623 (0.81) |
0.838 (0.967) |
5q loss | 5 (6%) | 85 |
0.118 (0.282) |
0.461 (0.664) |
0.407 (0.619) |
0.211 (0.405) |
0.0334 (0.131) |
0.0794 (0.219) |
0.463 (0.665) |
0.0942 (0.242) |
||
6p loss | 19 (21%) | 71 |
0.00068 (0.00754) |
0.81 (0.946) |
0.613 (0.801) |
0.235 (0.435) |
0.612 (0.8) |
0.694 (0.856) |
0.734 (0.885) |
0.1 (0.256) |
0.47 (0.668) |
0.261 (0.458) |
6q loss | 22 (24%) | 68 |
0.0001 (0.00186) |
0.636 (0.816) |
0.749 (0.9) |
0.274 (0.473) |
0.592 (0.783) |
0.691 (0.854) |
0.595 (0.785) |
0.176 (0.367) |
0.389 (0.61) |
0.19 (0.386) |
7q loss | 6 (7%) | 84 |
0.0649 (0.195) |
0.502 (0.699) |
0.606 (0.796) |
0.78 (0.924) |
0.626 (0.811) |
0.654 (0.829) |
1 (1.00) |
0.234 (0.435) |
0.484 (0.679) |
0.0386 (0.142) |
9q loss | 12 (13%) | 78 |
0.038 (0.142) |
0.0967 (0.248) |
0.829 (0.958) |
0.163 (0.349) |
0.176 (0.367) |
0.313 (0.517) |
0.469 (0.667) |
0.57 (0.764) |
0.3 (0.503) |
0.812 (0.947) |
11p loss | 23 (26%) | 67 |
0.00125 (0.0116) |
0.101 (0.258) |
0.967 (1.00) |
0.798 (0.937) |
0.295 (0.496) |
0.211 (0.405) |
0.331 (0.541) |
0.826 (0.958) |
0.581 (0.772) |
0.634 (0.815) |
12p loss | 5 (6%) | 85 |
0.475 (0.671) |
0.182 (0.373) |
0.267 (0.463) |
0.0823 (0.221) |
0.626 (0.811) |
0.0378 (0.142) |
0.0516 (0.172) |
0.516 (0.71) |
0.348 (0.56) |
0.0589 (0.184) |
13q loss | 39 (43%) | 51 |
0.00127 (0.0117) |
0.128 (0.298) |
0.973 (1.00) |
0.942 (1.00) |
0.53 (0.721) |
0.885 (1.00) |
0.839 (0.967) |
0.303 (0.507) |
0.953 (1.00) |
0.171 (0.361) |
16p loss | 4 (4%) | 86 |
0.351 (0.564) |
0.26 (0.458) |
0.532 (0.721) |
0.205 (0.402) |
0.0397 (0.143) |
0.0769 (0.219) |
0.458 (0.662) |
0.745 (0.896) |
0.203 (0.4) |
0.678 (0.848) |
18p loss | 37 (41%) | 53 |
0.00387 (0.0299) |
0.829 (0.958) |
0.954 (1.00) |
0.688 (0.854) |
0.64 (0.818) |
0.646 (0.821) |
0.881 (1.00) |
0.694 (0.856) |
0.805 (0.943) |
0.116 (0.282) |
18q loss | 35 (39%) | 55 |
0.0039 (0.0299) |
0.697 (0.857) |
1 (1.00) |
0.533 (0.721) |
0.73 (0.883) |
0.934 (1.00) |
0.596 (0.786) |
0.915 (1.00) |
0.63 (0.813) |
0.193 (0.388) |
21q loss | 15 (17%) | 75 |
0.0169 (0.0829) |
0.261 (0.458) |
0.0629 (0.194) |
0.052 (0.173) |
0.246 (0.446) |
0.253 (0.452) |
0.238 (0.438) |
0.507 (0.703) |
0.476 (0.672) |
0.932 (1.00) |
22q loss | 48 (53%) | 42 |
0.00453 (0.0326) |
0.246 (0.446) |
0.975 (1.00) |
0.482 (0.679) |
0.679 (0.848) |
0.282 (0.484) |
0.716 (0.871) |
0.826 (0.958) |
0.786 (0.931) |
0.461 (0.664) |
xp loss | 16 (18%) | 74 |
0.00068 (0.00754) |
0.104 (0.262) |
0.165 (0.351) |
0.062 (0.192) |
0.0539 (0.177) |
0.0679 (0.201) |
0.695 (0.856) |
0.104 (0.261) |
0.294 (0.495) |
0.307 (0.512) |
1p gain | 4 (4%) | 86 |
0.156 (0.337) |
|||||||||
3p gain | 14 (16%) | 76 |
0.0693 (0.203) |
0.0587 (0.184) |
0.215 (0.41) |
0.884 (1.00) |
0.384 (0.603) |
0.364 (0.582) |
0.4 (0.613) |
0.109 (0.269) |
0.313 (0.517) |
0.273 (0.473) |
11p gain | 5 (6%) | 85 |
0.118 (0.282) |
|||||||||
17p gain | 5 (6%) | 85 |
0.114 (0.28) |
0.439 (0.643) |
0.686 (0.854) |
0.144 (0.323) |
0.289 (0.491) |
0.793 (0.934) |
0.61 (0.799) |
0.671 (0.842) |
||
18p gain | 6 (7%) | 84 |
0.755 (0.906) |
|||||||||
18q gain | 5 (6%) | 85 |
0.397 (0.613) |
|||||||||
22q gain | 3 (3%) | 87 |
0.22 (0.417) |
|||||||||
7p loss | 5 (6%) | 85 |
0.102 (0.258) |
0.788 (0.931) |
0.405 (0.619) |
0.205 (0.402) |
0.909 (1.00) |
0.891 (1.00) |
0.541 (0.73) |
0.413 (0.622) |
0.258 (0.457) |
0.104 (0.262) |
10p loss | 12 (13%) | 78 |
0.437 (0.643) |
0.888 (1.00) |
1 (1.00) |
0.0555 (0.179) |
0.182 (0.373) |
1 (1.00) |
0.642 (0.818) |
0.709 (0.866) |
0.666 (0.837) |
0.496 (0.692) |
10q loss | 10 (11%) | 80 |
0.439 (0.643) |
0.843 (0.968) |
1 (1.00) |
0.238 (0.438) |
0.418 (0.628) |
1 (1.00) |
0.58 (0.772) |
0.71 (0.866) |
0.629 (0.813) |
0.488 (0.684) |
16q loss | 5 (6%) | 85 |
0.177 (0.367) |
0.121 (0.286) |
0.202 (0.399) |
0.178 (0.367) |
0.0681 (0.201) |
0.0851 (0.226) |
0.223 (0.42) |
0.31 (0.516) |
0.0736 (0.213) |
0.841 (0.967) |
20p loss | 9 (10%) | 81 |
0.106 (0.265) |
0.22 (0.417) |
0.52 (0.713) |
0.856 (0.98) |
0.193 (0.387) |
0.126 (0.298) |
0.128 (0.298) |
0.446 (0.652) |
0.116 (0.282) |
0.641 (0.818) |
20q loss | 3 (3%) | 87 |
0.171 (0.361) |
P value = 0.0479 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
1Q GAIN MUTATED | 4 | 2 | 0 | 0 |
1Q GAIN WILD-TYPE | 20 | 12 | 16 | 23 |
P value = 0.00273 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
2P GAIN MUTATED | 3 | 0 | 0 | 8 | 2 | 0 | 0 |
2P GAIN WILD-TYPE | 16 | 18 | 13 | 10 | 9 | 6 | 5 |
P value = 0.00702 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
2P GAIN MUTATED | 6 | 1 | 2 | 0 | 0 | 0 | 0 |
2P GAIN WILD-TYPE | 10 | 13 | 6 | 17 | 9 | 12 | 2 |
P value = 0.013 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
2P GAIN MUTATED | 7 | 0 | 0 | 2 |
2P GAIN WILD-TYPE | 17 | 14 | 16 | 21 |
P value = 0.00025 (Fisher's exact test), Q value = 0.0035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
2P GAIN MUTATED | 8 | 0 | 1 | 0 |
2P GAIN WILD-TYPE | 15 | 23 | 6 | 24 |
P value = 0.019 (Fisher's exact test), Q value = 0.09
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
2P GAIN MUTATED | 0 | 1 | 1 | 6 | 1 |
2P GAIN WILD-TYPE | 16 | 26 | 10 | 14 | 3 |
P value = 0.0329 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
2P GAIN MUTATED | 4 | 2 | 3 | 0 |
2P GAIN WILD-TYPE | 12 | 17 | 13 | 26 |
P value = 0.0113 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
2P GAIN MUTATED | 0 | 1 | 1 | 6 | 1 | 0 |
2P GAIN WILD-TYPE | 6 | 23 | 10 | 8 | 10 | 11 |
P value = 0.00322 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
2Q GAIN MUTATED | 3 | 0 | 0 | 8 | 2 | 0 | 0 |
2Q GAIN WILD-TYPE | 16 | 18 | 13 | 10 | 9 | 6 | 5 |
P value = 0.011 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
2Q GAIN MUTATED | 6 | 1 | 1 | 0 | 0 | 0 | 0 |
2Q GAIN WILD-TYPE | 10 | 13 | 7 | 17 | 9 | 12 | 2 |
P value = 0.00552 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
2Q GAIN MUTATED | 1 | 1 | 1 | 3 | 0 | 0 | 0 | 0 |
2Q GAIN WILD-TYPE | 7 | 6 | 6 | 0 | 4 | 4 | 6 | 6 |
P value = 0.00377 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
2Q GAIN MUTATED | 7 | 0 | 0 | 1 |
2Q GAIN WILD-TYPE | 17 | 14 | 16 | 22 |
P value = 0.00098 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
2Q GAIN MUTATED | 7 | 0 | 1 | 0 |
2Q GAIN WILD-TYPE | 16 | 23 | 6 | 24 |
P value = 0.0389 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
2Q GAIN MUTATED | 6 | 2 | 0 |
2Q GAIN WILD-TYPE | 23 | 22 | 25 |
P value = 0.0011 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
2Q GAIN MUTATED | 0 | 0 | 1 | 7 | 0 |
2Q GAIN WILD-TYPE | 16 | 27 | 10 | 13 | 4 |
P value = 0.0137 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
2Q GAIN MUTATED | 4 | 1 | 3 | 0 |
2Q GAIN WILD-TYPE | 12 | 18 | 13 | 26 |
P value = 9e-05 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
2Q GAIN MUTATED | 0 | 0 | 1 | 7 | 0 | 0 |
2Q GAIN WILD-TYPE | 6 | 24 | 10 | 7 | 11 | 11 |
P value = 0.046 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
3Q GAIN MUTATED | 3 | 1 | 5 | 3 | 0 | 3 | 1 |
3Q GAIN WILD-TYPE | 16 | 17 | 8 | 15 | 11 | 3 | 4 |
P value = 0.0114 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
3Q GAIN MUTATED | 0 | 4 | 0 | 2 | 2 | 2 | 2 |
3Q GAIN WILD-TYPE | 16 | 10 | 8 | 15 | 7 | 10 | 0 |
P value = 4e-05 (Fisher's exact test), Q value = 0.001
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
4P GAIN MUTATED | 1 | 8 | 9 | 6 | 4 | 5 | 5 |
4P GAIN WILD-TYPE | 18 | 10 | 4 | 12 | 7 | 1 | 0 |
P value = 0.00728 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
4P GAIN MUTATED | 2 | 3 | 3 | 12 | 6 | 5 | 1 |
4P GAIN WILD-TYPE | 14 | 11 | 5 | 5 | 3 | 7 | 1 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
4P GAIN MUTATED | 1 | 9 | 11 | 10 |
4P GAIN WILD-TYPE | 23 | 5 | 5 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
4P GAIN MUTATED | 2 | 16 | 0 | 13 |
4P GAIN WILD-TYPE | 21 | 7 | 7 | 11 |
P value = 0.00153 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
4P GAIN MUTATED | 11 | 10 | 6 | 2 | 3 |
4P GAIN WILD-TYPE | 5 | 17 | 5 | 18 | 1 |
P value = 7e-05 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
4Q GAIN MUTATED | 1 | 7 | 8 | 4 | 5 | 5 | 5 |
4Q GAIN WILD-TYPE | 18 | 11 | 5 | 14 | 6 | 1 | 0 |
P value = 0.00445 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
4Q GAIN MUTATED | 2 | 3 | 3 | 12 | 6 | 4 | 0 |
4Q GAIN WILD-TYPE | 14 | 11 | 5 | 5 | 3 | 8 | 2 |
P value = 0.00012 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
4Q GAIN MUTATED | 1 | 9 | 9 | 10 |
4Q GAIN WILD-TYPE | 23 | 5 | 7 | 13 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
4Q GAIN MUTATED | 2 | 15 | 0 | 12 |
4Q GAIN WILD-TYPE | 21 | 8 | 7 | 12 |
P value = 0.00028 (Fisher's exact test), Q value = 0.0037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
4Q GAIN MUTATED | 11 | 10 | 5 | 1 | 3 |
4Q GAIN WILD-TYPE | 5 | 17 | 6 | 19 | 1 |
P value = 0.0248 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
4Q GAIN MUTATED | 5 | 10 | 5 | 1 | 3 | 5 |
4Q GAIN WILD-TYPE | 1 | 14 | 6 | 13 | 8 | 6 |
P value = 4e-05 (Fisher's exact test), Q value = 0.001
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
5P GAIN MUTATED | 4 | 17 | 11 | 10 | 5 | 5 | 5 |
5P GAIN WILD-TYPE | 15 | 1 | 2 | 8 | 6 | 1 | 0 |
P value = 0.00345 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
5P GAIN MUTATED | 5 | 8 | 3 | 13 | 8 | 11 | 2 |
5P GAIN WILD-TYPE | 11 | 6 | 5 | 4 | 1 | 1 | 0 |
P value = 0.0343 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
5P GAIN MUTATED | 4 | 5 | 6 | 1 | 4 | 4 | 5 | 1 |
5P GAIN WILD-TYPE | 4 | 2 | 1 | 2 | 0 | 0 | 1 | 5 |
P value = 0.00053 (Fisher's exact test), Q value = 0.0063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
5P GAIN MUTATED | 7 | 11 | 13 | 18 |
5P GAIN WILD-TYPE | 17 | 3 | 3 | 5 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
5P GAIN MUTATED | 6 | 18 | 3 | 22 |
5P GAIN WILD-TYPE | 17 | 5 | 4 | 2 |
P value = 0.00305 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
5P GAIN MUTATED | 5 | 10 | 14 | 20 |
5P GAIN WILD-TYPE | 11 | 9 | 2 | 6 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
5Q GAIN MUTATED | 3 | 16 | 13 | 8 | 5 | 5 | 5 |
5Q GAIN WILD-TYPE | 16 | 2 | 0 | 10 | 6 | 1 | 0 |
P value = 0.00037 (Fisher's exact test), Q value = 0.0047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
5Q GAIN MUTATED | 5 | 7 | 3 | 15 | 8 | 11 | 1 |
5Q GAIN WILD-TYPE | 11 | 7 | 5 | 2 | 1 | 1 | 1 |
P value = 0.00018 (Fisher's exact test), Q value = 0.0028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
5Q GAIN MUTATED | 7 | 12 | 14 | 16 |
5Q GAIN WILD-TYPE | 17 | 2 | 2 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
5Q GAIN MUTATED | 5 | 20 | 3 | 21 |
5Q GAIN WILD-TYPE | 18 | 3 | 4 | 3 |
P value = 0.0382 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
5Q GAIN MUTATED | 15 | 14 | 21 |
5Q GAIN WILD-TYPE | 14 | 10 | 4 |
P value = 0.0101 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
5Q GAIN MUTATED | 5 | 11 | 13 | 20 |
5Q GAIN WILD-TYPE | 11 | 8 | 3 | 6 |
P value = 0.048 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
6P GAIN MUTATED | 4 | 1 | 2 | 2 | 6 | 1 | 2 |
6P GAIN WILD-TYPE | 15 | 17 | 11 | 16 | 5 | 5 | 3 |
P value = 0.0393 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
6P GAIN MUTATED | 6 | 0 | 6 | 3 |
6P GAIN WILD-TYPE | 18 | 14 | 10 | 20 |
P value = 0.0224 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
6P GAIN MUTATED | 4 | 1 | 7 | 3 |
6P GAIN WILD-TYPE | 12 | 18 | 9 | 23 |
P value = 6e-05 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
6Q GAIN MUTATED | 5 | 1 | 0 | 0 | 7 | 1 | 2 |
6Q GAIN WILD-TYPE | 14 | 17 | 13 | 18 | 4 | 5 | 3 |
P value = 1e-04 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
7P GAIN MUTATED | 4 | 12 | 12 | 9 | 3 | 3 | 5 |
7P GAIN WILD-TYPE | 15 | 6 | 1 | 9 | 8 | 3 | 0 |
P value = 0.046 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
7P GAIN MUTATED | 4 | 7 | 4 | 11 | 8 | 6 | 2 |
7P GAIN WILD-TYPE | 12 | 7 | 4 | 6 | 1 | 6 | 0 |
P value = 8e-05 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
7P GAIN MUTATED | 6 | 13 | 12 | 11 |
7P GAIN WILD-TYPE | 18 | 1 | 4 | 12 |
P value = 0.00136 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
7P GAIN MUTATED | 7 | 19 | 2 | 14 |
7P GAIN WILD-TYPE | 16 | 4 | 5 | 10 |
P value = 0.0152 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
7P GAIN MUTATED | 4 | 11 | 13 | 13 |
7P GAIN WILD-TYPE | 12 | 8 | 3 | 13 |
P value = 0.00017 (Fisher's exact test), Q value = 0.0027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
7Q GAIN MUTATED | 4 | 12 | 12 | 9 | 3 | 3 | 5 |
7Q GAIN WILD-TYPE | 15 | 6 | 1 | 9 | 8 | 3 | 0 |
P value = 0.00889 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
7Q GAIN MUTATED | 3 | 7 | 4 | 12 | 8 | 6 | 2 |
7Q GAIN WILD-TYPE | 13 | 7 | 4 | 5 | 1 | 6 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
7Q GAIN MUTATED | 5 | 14 | 12 | 11 |
7Q GAIN WILD-TYPE | 19 | 0 | 4 | 12 |
P value = 0.00012 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
7Q GAIN MUTATED | 6 | 20 | 2 | 14 |
7Q GAIN WILD-TYPE | 17 | 3 | 5 | 10 |
P value = 0.0149 (Fisher's exact test), Q value = 0.076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
7Q GAIN MUTATED | 4 | 11 | 13 | 13 |
7Q GAIN WILD-TYPE | 12 | 8 | 3 | 13 |
P value = 0.0218 (Fisher's exact test), Q value = 0.098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
7Q GAIN MUTATED | 4 | 16 | 9 | 3 | 5 | 4 |
7Q GAIN WILD-TYPE | 2 | 8 | 2 | 11 | 6 | 7 |
P value = 0.0033 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
8P GAIN MUTATED | 1 | 12 | 6 | 6 | 3 | 3 | 1 |
8P GAIN WILD-TYPE | 18 | 6 | 7 | 12 | 8 | 3 | 4 |
P value = 0.0234 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
8P GAIN MUTATED | 5 | 2 | 8 | 13 |
8P GAIN WILD-TYPE | 11 | 17 | 8 | 13 |
P value = 0.00616 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
8Q GAIN MUTATED | 2 | 12 | 8 | 9 | 3 | 3 | 1 |
8Q GAIN WILD-TYPE | 17 | 6 | 5 | 9 | 8 | 3 | 4 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
9P GAIN MUTATED | 1 | 1 | 11 | 2 | 3 | 3 | 0 |
9P GAIN WILD-TYPE | 18 | 17 | 2 | 16 | 8 | 3 | 5 |
P value = 0.0116 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
9P GAIN MUTATED | 3 | 0 | 2 | 7 | 2 | 1 | 2 |
9P GAIN WILD-TYPE | 13 | 14 | 6 | 10 | 7 | 11 | 0 |
P value = 0.0483 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 10 | 11 | 10 | 14 |
9P GAIN MUTATED | 1 | 4 | 0 | 6 |
9P GAIN WILD-TYPE | 9 | 7 | 10 | 8 |
P value = 0.017 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
9P GAIN MUTATED | 2 | 7 | 4 | 3 |
9P GAIN WILD-TYPE | 22 | 7 | 12 | 20 |
P value = 0.0137 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
9P GAIN MUTATED | 4 | 10 | 0 | 2 |
9P GAIN WILD-TYPE | 19 | 13 | 7 | 22 |
P value = 0.028 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
9P GAIN MUTATED | 2 | 8 | 5 | 2 |
9P GAIN WILD-TYPE | 14 | 11 | 11 | 24 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
9Q GAIN MUTATED | 1 | 1 | 11 | 5 | 5 | 3 | 1 |
9Q GAIN WILD-TYPE | 18 | 17 | 2 | 13 | 6 | 3 | 4 |
P value = 0.00434 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
9Q GAIN MUTATED | 6 | 0 | 2 | 8 | 2 | 1 | 2 |
9Q GAIN WILD-TYPE | 10 | 14 | 6 | 9 | 7 | 11 | 0 |
P value = 0.0355 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
9Q GAIN MUTATED | 5 | 8 | 4 | 3 |
9Q GAIN WILD-TYPE | 19 | 6 | 12 | 20 |
P value = 0.00534 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
9Q GAIN MUTATED | 7 | 11 | 0 | 2 |
9Q GAIN WILD-TYPE | 16 | 12 | 7 | 22 |
P value = 0.019 (Fisher's exact test), Q value = 0.09
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
9Q GAIN MUTATED | 9 | 10 | 2 |
9Q GAIN WILD-TYPE | 20 | 14 | 23 |
P value = 0.0146 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
9Q GAIN MUTATED | 4 | 9 | 6 | 2 |
9Q GAIN WILD-TYPE | 12 | 10 | 10 | 24 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
10P GAIN MUTATED | 3 | 0 | 9 | 10 | 1 | 1 | 1 |
10P GAIN WILD-TYPE | 16 | 18 | 4 | 8 | 10 | 5 | 4 |
P value = 0.0217 (Fisher's exact test), Q value = 0.098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 10 | 11 | 10 | 14 |
10P GAIN MUTATED | 3 | 3 | 0 | 8 |
10P GAIN WILD-TYPE | 7 | 8 | 10 | 6 |
P value = 0.0134 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
10P GAIN MUTATED | 6 | 3 | 0 | 2 | 1 | 1 | 0 | 1 |
10P GAIN WILD-TYPE | 2 | 4 | 7 | 1 | 3 | 3 | 6 | 5 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
10P GAIN MUTATED | 6 | 12 | 3 | 2 |
10P GAIN WILD-TYPE | 18 | 2 | 13 | 21 |
P value = 0.00016 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
10P GAIN MUTATED | 7 | 14 | 1 | 1 |
10P GAIN WILD-TYPE | 16 | 9 | 6 | 23 |
P value = 0.021 (Fisher's exact test), Q value = 0.096
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
10P GAIN MUTATED | 4 | 10 | 6 | 3 |
10P GAIN WILD-TYPE | 12 | 9 | 10 | 23 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
10Q GAIN MUTATED | 2 | 0 | 8 | 12 | 2 | 1 | 1 |
10Q GAIN WILD-TYPE | 17 | 18 | 5 | 6 | 9 | 5 | 4 |
P value = 0.0145 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
10Q GAIN MUTATED | 6 | 2 | 0 | 2 | 1 | 1 | 0 | 1 |
10Q GAIN WILD-TYPE | 2 | 5 | 7 | 1 | 3 | 3 | 6 | 5 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
10Q GAIN MUTATED | 7 | 12 | 2 | 2 |
10Q GAIN WILD-TYPE | 17 | 2 | 14 | 21 |
P value = 0.00042 (Fisher's exact test), Q value = 0.0052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
10Q GAIN MUTATED | 8 | 13 | 1 | 1 |
10Q GAIN WILD-TYPE | 15 | 10 | 6 | 23 |
P value = 0.0311 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
10Q GAIN MUTATED | 9 | 11 | 3 |
10Q GAIN WILD-TYPE | 20 | 13 | 22 |
P value = 0.0285 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
10Q GAIN MUTATED | 5 | 10 | 5 | 3 |
10Q GAIN WILD-TYPE | 11 | 9 | 11 | 23 |
P value = 0.0301 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
11Q GAIN MUTATED | 1 | 0 | 0 | 5 | 0 | 0 | 0 |
11Q GAIN WILD-TYPE | 18 | 18 | 13 | 13 | 11 | 6 | 5 |
P value = 0.0399 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
11Q GAIN MUTATED | 4 | 0 | 0 | 0 |
11Q GAIN WILD-TYPE | 20 | 14 | 16 | 23 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
12P GAIN MUTATED | 3 | 18 | 12 | 14 | 7 | 5 | 5 |
12P GAIN WILD-TYPE | 16 | 0 | 1 | 4 | 4 | 1 | 0 |
P value = 0.0133 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
12P GAIN MUTATED | 8 | 8 | 4 | 14 | 8 | 12 | 1 |
12P GAIN WILD-TYPE | 8 | 6 | 4 | 3 | 1 | 0 | 1 |
P value = 0.00011 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
12P GAIN MUTATED | 9 | 14 | 13 | 18 |
12P GAIN WILD-TYPE | 15 | 0 | 3 | 5 |
P value = 6e-05 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
12P GAIN MUTATED | 10 | 20 | 2 | 22 |
12P GAIN WILD-TYPE | 13 | 3 | 5 | 2 |
P value = 0.0409 (Fisher's exact test), Q value = 0.15
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
12P GAIN MUTATED | 8 | 11 | 14 | 21 |
12P GAIN WILD-TYPE | 8 | 8 | 2 | 5 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
12Q GAIN MUTATED | 3 | 18 | 12 | 15 | 6 | 5 | 5 |
12Q GAIN WILD-TYPE | 16 | 0 | 1 | 3 | 5 | 1 | 0 |
P value = 0.0227 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
12Q GAIN MUTATED | 9 | 8 | 4 | 14 | 8 | 12 | 1 |
12Q GAIN WILD-TYPE | 7 | 6 | 4 | 3 | 1 | 0 | 1 |
P value = 0.028 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
12Q GAIN MUTATED | 7 | 6 | 6 | 3 | 2 | 4 | 5 | 1 |
12Q GAIN WILD-TYPE | 1 | 1 | 1 | 0 | 2 | 0 | 1 | 5 |
P value = 0.00058 (Fisher's exact test), Q value = 0.0066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
12Q GAIN MUTATED | 10 | 14 | 13 | 18 |
12Q GAIN WILD-TYPE | 14 | 0 | 3 | 5 |
P value = 0.00013 (Fisher's exact test), Q value = 0.0022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
12Q GAIN MUTATED | 11 | 20 | 2 | 22 |
12Q GAIN WILD-TYPE | 12 | 3 | 5 | 2 |
P value = 0.0284 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
13Q GAIN MUTATED | 1 | 1 | 4 | 0 |
13Q GAIN WILD-TYPE | 23 | 13 | 12 | 23 |
P value = 0.00347 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
14Q GAIN MUTATED | 1 | 2 | 8 | 4 | 4 | 0 | 2 |
14Q GAIN WILD-TYPE | 18 | 16 | 5 | 14 | 7 | 6 | 3 |
P value = 0.0197 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
14Q GAIN MUTATED | 3 | 0 | 3 | 8 | 2 | 1 | 1 |
14Q GAIN WILD-TYPE | 13 | 14 | 5 | 9 | 7 | 11 | 1 |
P value = 0.00029 (Fisher's exact test), Q value = 0.0038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
14Q GAIN MUTATED | 2 | 7 | 7 | 1 |
14Q GAIN WILD-TYPE | 22 | 7 | 9 | 22 |
P value = 0.00105 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
14Q GAIN MUTATED | 3 | 12 | 0 | 2 |
14Q GAIN WILD-TYPE | 20 | 11 | 7 | 22 |
P value = 0.00022 (Fisher's exact test), Q value = 0.0032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
14Q GAIN MUTATED | 13 | 5 | 0 |
14Q GAIN WILD-TYPE | 16 | 19 | 25 |
P value = 0.00019 (Fisher's exact test), Q value = 0.0029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
14Q GAIN MUTATED | 7 | 0 | 3 | 5 | 3 |
14Q GAIN WILD-TYPE | 9 | 27 | 8 | 15 | 1 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
14Q GAIN MUTATED | 2 | 5 | 10 | 0 |
14Q GAIN WILD-TYPE | 14 | 14 | 6 | 26 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
14Q GAIN MUTATED | 4 | 0 | 6 | 3 | 4 | 0 |
14Q GAIN WILD-TYPE | 2 | 24 | 5 | 11 | 7 | 11 |
P value = 0.0141 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
15Q GAIN MUTATED | 1 | 1 | 0 | 3 | 3 | 0 | 3 |
15Q GAIN WILD-TYPE | 18 | 17 | 13 | 15 | 8 | 6 | 2 |
P value = 0.029 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
15Q GAIN MUTATED | 0 | 1 | 3 | 5 | 1 | 0 | 0 |
15Q GAIN WILD-TYPE | 16 | 13 | 5 | 12 | 8 | 12 | 2 |
P value = 0.00971 (Fisher's exact test), Q value = 0.061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
15Q GAIN MUTATED | 0 | 3 | 5 | 2 |
15Q GAIN WILD-TYPE | 24 | 11 | 11 | 21 |
P value = 0.00495 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
15Q GAIN MUTATED | 1 | 8 | 0 | 1 |
15Q GAIN WILD-TYPE | 22 | 15 | 7 | 23 |
P value = 7e-04 (Fisher's exact test), Q value = 0.0077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
15Q GAIN MUTATED | 6 | 1 | 1 | 0 | 2 |
15Q GAIN WILD-TYPE | 10 | 26 | 10 | 20 | 2 |
P value = 0.0165 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
15Q GAIN MUTATED | 0 | 3 | 5 | 1 |
15Q GAIN WILD-TYPE | 16 | 16 | 11 | 25 |
P value = 0.0429 (Fisher's exact test), Q value = 0.15
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
15Q GAIN MUTATED | 1 | 1 | 4 | 0 | 2 | 1 |
15Q GAIN WILD-TYPE | 5 | 23 | 7 | 14 | 9 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
16P GAIN MUTATED | 2 | 18 | 12 | 7 | 4 | 4 | 3 |
16P GAIN WILD-TYPE | 17 | 0 | 1 | 11 | 7 | 2 | 2 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
16P GAIN MUTATED | 2 | 5 | 5 | 13 | 5 | 12 | 1 |
16P GAIN WILD-TYPE | 14 | 9 | 3 | 4 | 4 | 0 | 1 |
P value = 5e-05 (Fisher's exact test), Q value = 0.0012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
16P GAIN MUTATED | 4 | 11 | 12 | 16 |
16P GAIN WILD-TYPE | 20 | 3 | 4 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
16P GAIN MUTATED | 4 | 20 | 1 | 18 |
16P GAIN WILD-TYPE | 19 | 3 | 6 | 6 |
P value = 0.0205 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
16P GAIN MUTATED | 12 | 17 | 6 | 5 | 3 |
16P GAIN WILD-TYPE | 4 | 10 | 5 | 15 | 1 |
P value = 0.0112 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
16P GAIN MUTATED | 3 | 11 | 10 | 18 |
16P GAIN WILD-TYPE | 13 | 8 | 6 | 8 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
16Q GAIN MUTATED | 2 | 18 | 11 | 6 | 4 | 4 | 2 |
16Q GAIN WILD-TYPE | 17 | 0 | 2 | 12 | 7 | 2 | 3 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
16Q GAIN MUTATED | 2 | 5 | 5 | 13 | 4 | 12 | 1 |
16Q GAIN WILD-TYPE | 14 | 9 | 3 | 4 | 5 | 0 | 1 |
P value = 9e-05 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
16Q GAIN MUTATED | 4 | 10 | 12 | 16 |
16Q GAIN WILD-TYPE | 20 | 4 | 4 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
16Q GAIN MUTATED | 4 | 19 | 1 | 18 |
16Q GAIN WILD-TYPE | 19 | 4 | 6 | 6 |
P value = 0.0137 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
16Q GAIN MUTATED | 13 | 16 | 6 | 5 | 2 |
16Q GAIN WILD-TYPE | 3 | 11 | 5 | 15 | 2 |
P value = 0.00052 (Fisher's exact test), Q value = 0.0063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
16Q GAIN MUTATED | 2 | 9 | 12 | 18 |
16Q GAIN WILD-TYPE | 14 | 10 | 4 | 8 |
P value = 0.00629 (Fisher's exact test), Q value = 0.042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
17Q GAIN MUTATED | 1 | 0 | 0 | 3 | 0 | 3 | 0 |
17Q GAIN WILD-TYPE | 18 | 18 | 13 | 15 | 11 | 3 | 5 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
19P GAIN MUTATED | 4 | 8 | 13 | 14 | 7 | 5 | 5 |
19P GAIN WILD-TYPE | 15 | 10 | 0 | 4 | 4 | 1 | 0 |
P value = 0.0191 (Fisher's exact test), Q value = 0.09
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
19P GAIN MUTATED | 8 | 7 | 4 | 2 | 1 | 3 | 4 | 2 |
19P GAIN WILD-TYPE | 0 | 0 | 3 | 1 | 3 | 1 | 2 | 4 |
P value = 0.00101 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
19P GAIN MUTATED | 11 | 14 | 12 | 11 |
19P GAIN WILD-TYPE | 13 | 0 | 4 | 12 |
P value = 0.00054 (Fisher's exact test), Q value = 0.0063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
19P GAIN MUTATED | 14 | 21 | 1 | 12 |
19P GAIN WILD-TYPE | 9 | 2 | 6 | 12 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
19Q GAIN MUTATED | 2 | 8 | 12 | 14 | 7 | 4 | 5 |
19Q GAIN WILD-TYPE | 17 | 10 | 1 | 4 | 4 | 2 | 0 |
P value = 0.00027 (Fisher's exact test), Q value = 0.0036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
19Q GAIN MUTATED | 10 | 14 | 11 | 9 |
19Q GAIN WILD-TYPE | 14 | 0 | 5 | 14 |
P value = 0.00115 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
19Q GAIN MUTATED | 12 | 20 | 1 | 11 |
19Q GAIN WILD-TYPE | 11 | 3 | 6 | 13 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
20P GAIN MUTATED | 2 | 16 | 8 | 8 | 3 | 5 | 4 |
20P GAIN WILD-TYPE | 17 | 2 | 5 | 10 | 8 | 1 | 1 |
P value = 0.00032 (Fisher's exact test), Q value = 0.0041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
20P GAIN MUTATED | 4 | 7 | 1 | 10 | 5 | 12 | 1 |
20P GAIN WILD-TYPE | 12 | 7 | 7 | 7 | 4 | 0 | 1 |
P value = 0.0416 (Fisher's exact test), Q value = 0.15
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 10 | 11 | 10 | 14 |
20P GAIN MUTATED | 6 | 2 | 8 | 7 |
20P GAIN WILD-TYPE | 4 | 9 | 2 | 7 |
P value = 0.00852 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
20P GAIN MUTATED | 5 | 2 | 6 | 1 | 1 | 4 | 4 | 0 |
20P GAIN WILD-TYPE | 3 | 5 | 1 | 2 | 3 | 0 | 2 | 6 |
P value = 0.00025 (Fisher's exact test), Q value = 0.0035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
20P GAIN MUTATED | 4 | 9 | 8 | 18 |
20P GAIN WILD-TYPE | 20 | 5 | 8 | 5 |
P value = 7e-05 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
20P GAIN MUTATED | 6 | 12 | 1 | 20 |
20P GAIN WILD-TYPE | 17 | 11 | 6 | 4 |
P value = 0.00218 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
20P GAIN MUTATED | 10 | 10 | 20 |
20P GAIN WILD-TYPE | 19 | 14 | 5 |
P value = 0.00538 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
20P GAIN MUTATED | 4 | 9 | 6 | 20 |
20P GAIN WILD-TYPE | 12 | 10 | 10 | 6 |
P value = 0.00533 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
20P GAIN MUTATED | 2 | 18 | 5 | 4 | 2 | 8 |
20P GAIN WILD-TYPE | 4 | 6 | 6 | 10 | 9 | 3 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
20Q GAIN MUTATED | 3 | 16 | 9 | 9 | 3 | 5 | 4 |
20Q GAIN WILD-TYPE | 16 | 2 | 4 | 9 | 8 | 1 | 1 |
P value = 0.00018 (Fisher's exact test), Q value = 0.0028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
20Q GAIN MUTATED | 4 | 8 | 1 | 12 | 5 | 12 | 1 |
20Q GAIN WILD-TYPE | 12 | 6 | 7 | 5 | 4 | 0 | 1 |
P value = 0.0113 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 10 | 11 | 10 | 14 |
20Q GAIN MUTATED | 8 | 2 | 8 | 7 |
20Q GAIN WILD-TYPE | 2 | 9 | 2 | 7 |
P value = 0.00015 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
20Q GAIN MUTATED | 5 | 11 | 8 | 18 |
20Q GAIN WILD-TYPE | 19 | 3 | 8 | 5 |
P value = 0.00027 (Fisher's exact test), Q value = 0.0036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
20Q GAIN MUTATED | 6 | 14 | 2 | 20 |
20Q GAIN WILD-TYPE | 17 | 9 | 5 | 4 |
P value = 0.00355 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
20Q GAIN MUTATED | 10 | 13 | 20 |
20Q GAIN WILD-TYPE | 19 | 11 | 5 |
P value = 0.0131 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
20Q GAIN MUTATED | 5 | 11 | 6 | 20 |
20Q GAIN WILD-TYPE | 11 | 8 | 10 | 6 |
P value = 0.0454 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
20Q GAIN MUTATED | 3 | 18 | 5 | 4 | 4 | 8 |
20Q GAIN WILD-TYPE | 3 | 6 | 6 | 10 | 7 | 3 |
P value = 0.00424 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
21Q GAIN MUTATED | 7 | 2 | 2 | 12 | 2 | 1 | 0 |
21Q GAIN WILD-TYPE | 9 | 12 | 6 | 5 | 7 | 11 | 2 |
P value = 0.033 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
21Q GAIN MUTATED | 7 | 9 | 6 | 4 |
21Q GAIN WILD-TYPE | 17 | 5 | 10 | 19 |
P value = 0.00102 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
21Q GAIN MUTATED | 7 | 15 | 1 | 3 |
21Q GAIN WILD-TYPE | 16 | 8 | 6 | 21 |
P value = 0.0224 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
21Q GAIN MUTATED | 15 | 7 | 4 |
21Q GAIN WILD-TYPE | 14 | 17 | 21 |
P value = 0.02 (Fisher's exact test), Q value = 0.093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
21Q GAIN MUTATED | 10 | 4 | 4 | 6 | 2 |
21Q GAIN WILD-TYPE | 6 | 23 | 7 | 14 | 2 |
P value = 0.0188 (Fisher's exact test), Q value = 0.09
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
21Q GAIN MUTATED | 5 | 6 | 10 | 4 |
21Q GAIN WILD-TYPE | 11 | 13 | 6 | 22 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
XP GAIN MUTATED | 3 | 17 | 9 | 6 | 3 | 1 | 4 |
XP GAIN WILD-TYPE | 16 | 1 | 4 | 12 | 8 | 5 | 1 |
P value = 0.0297 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
XP GAIN MUTATED | 5 | 5 | 2 | 9 | 6 | 10 | 2 |
XP GAIN WILD-TYPE | 11 | 9 | 6 | 8 | 3 | 2 | 0 |
P value = 0.0235 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
XP GAIN MUTATED | 6 | 5 | 5 | 0 | 3 | 3 | 4 | 0 |
XP GAIN WILD-TYPE | 2 | 2 | 2 | 3 | 1 | 1 | 2 | 6 |
P value = 0.00288 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
XP GAIN MUTATED | 5 | 11 | 10 | 12 |
XP GAIN WILD-TYPE | 19 | 3 | 6 | 11 |
P value = 0.0155 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
XP GAIN MUTATED | 6 | 14 | 2 | 16 |
XP GAIN WILD-TYPE | 17 | 9 | 5 | 8 |
P value = 0.00859 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
XP GAIN MUTATED | 5 | 16 | 7 | 2 | 4 | 4 |
XP GAIN WILD-TYPE | 1 | 8 | 4 | 12 | 7 | 7 |
P value = 8e-05 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
XQ GAIN MUTATED | 4 | 16 | 8 | 5 | 3 | 1 | 4 |
XQ GAIN WILD-TYPE | 15 | 2 | 5 | 13 | 8 | 5 | 1 |
P value = 0.00514 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
XQ GAIN MUTATED | 4 | 5 | 1 | 9 | 6 | 10 | 2 |
XQ GAIN WILD-TYPE | 12 | 9 | 7 | 8 | 3 | 2 | 0 |
P value = 0.0329 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
XQ GAIN MUTATED | 6 | 4 | 5 | 0 | 3 | 3 | 4 | 0 |
XQ GAIN WILD-TYPE | 2 | 3 | 2 | 3 | 1 | 1 | 2 | 6 |
P value = 0.00439 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
XQ GAIN MUTATED | 5 | 11 | 9 | 12 |
XQ GAIN WILD-TYPE | 19 | 3 | 7 | 11 |
P value = 0.024 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
XQ GAIN MUTATED | 6 | 13 | 2 | 16 |
XQ GAIN WILD-TYPE | 17 | 10 | 5 | 8 |
P value = 0.0301 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
XQ GAIN MUTATED | 4 | 16 | 6 | 2 | 4 | 4 |
XQ GAIN WILD-TYPE | 2 | 8 | 5 | 12 | 7 | 7 |
P value = 0.00022 (Fisher's exact test), Q value = 0.0032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
1P LOSS MUTATED | 4 | 1 | 3 | 12 | 3 | 5 | 1 |
1P LOSS WILD-TYPE | 15 | 17 | 10 | 6 | 8 | 1 | 4 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
1Q LOSS MUTATED | 0 | 1 | 2 | 11 | 2 | 4 | 1 |
1Q LOSS WILD-TYPE | 19 | 17 | 11 | 7 | 9 | 2 | 4 |
P value = 0.0109 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
1Q LOSS MUTATED | 0 | 0 | 0 | 2 | 1 | 0 | 2 | 3 |
1Q LOSS WILD-TYPE | 8 | 7 | 7 | 1 | 3 | 4 | 4 | 3 |
P value = 0.00205 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
2P LOSS MUTATED | 1 | 0 | 3 | 4 | 4 | 4 | 0 |
2P LOSS WILD-TYPE | 18 | 18 | 10 | 14 | 7 | 2 | 5 |
P value = 0.0358 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
2P LOSS MUTATED | 6 | 1 | 8 |
2P LOSS WILD-TYPE | 23 | 23 | 17 |
P value = 0.00115 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
2Q LOSS MUTATED | 1 | 0 | 3 | 2 | 4 | 4 | 0 |
2Q LOSS WILD-TYPE | 18 | 18 | 10 | 16 | 7 | 2 | 5 |
P value = 0.0337 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
2Q LOSS MUTATED | 4 | 1 | 8 |
2Q LOSS WILD-TYPE | 25 | 23 | 17 |
P value = 0.00521 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
3P LOSS MUTATED | 2 | 1 | 2 | 6 | 7 | 0 | 1 |
3P LOSS WILD-TYPE | 17 | 17 | 11 | 12 | 4 | 6 | 4 |
P value = 0.00107 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
3Q LOSS MUTATED | 4 | 0 | 1 | 6 | 7 | 0 | 1 |
3Q LOSS WILD-TYPE | 15 | 18 | 12 | 12 | 4 | 6 | 4 |
P value = 0.0137 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
3Q LOSS MUTATED | 7 | 0 | 7 | 3 |
3Q LOSS WILD-TYPE | 17 | 14 | 9 | 20 |
P value = 0.0293 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
3Q LOSS MUTATED | 8 | 7 | 1 | 1 |
3Q LOSS WILD-TYPE | 15 | 16 | 6 | 23 |
P value = 0.00673 (Fisher's exact test), Q value = 0.045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
3Q LOSS MUTATED | 5 | 3 | 7 | 1 |
3Q LOSS WILD-TYPE | 11 | 16 | 9 | 25 |
P value = 0.0385 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
3Q LOSS MUTATED | 0 | 3 | 5 | 6 | 1 | 1 |
3Q LOSS WILD-TYPE | 6 | 21 | 6 | 8 | 10 | 10 |
P value = 0.00397 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
4P LOSS MUTATED | 7 | 0 | 0 | 1 |
4P LOSS WILD-TYPE | 17 | 14 | 16 | 22 |
P value = 0.014 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
4P LOSS MUTATED | 6 | 0 | 1 | 1 |
4P LOSS WILD-TYPE | 17 | 23 | 6 | 23 |
P value = 0.0177 (Fisher's exact test), Q value = 0.085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
4Q LOSS MUTATED | 7 | 0 | 1 | 1 |
4Q LOSS WILD-TYPE | 17 | 14 | 15 | 22 |
P value = 0.0218 (Fisher's exact test), Q value = 0.098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
5P LOSS MUTATED | 5 | 1 | 0 | 0 |
5P LOSS WILD-TYPE | 18 | 22 | 7 | 24 |
P value = 0.0334 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
5Q LOSS MUTATED | 4 | 0 | 0 |
5Q LOSS WILD-TYPE | 25 | 24 | 25 |
P value = 0.00068 (Fisher's exact test), Q value = 0.0075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
6P LOSS MUTATED | 4 | 0 | 3 | 8 | 0 | 4 | 0 |
6P LOSS WILD-TYPE | 15 | 18 | 10 | 10 | 11 | 2 | 5 |
P value = 1e-04 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
6Q LOSS MUTATED | 4 | 0 | 4 | 10 | 0 | 4 | 0 |
6Q LOSS WILD-TYPE | 15 | 18 | 9 | 8 | 11 | 2 | 5 |
P value = 0.0386 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
7Q LOSS MUTATED | 0 | 0 | 0 | 3 | 0 | 2 |
7Q LOSS WILD-TYPE | 6 | 24 | 11 | 11 | 11 | 9 |
P value = 0.0394 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
8P LOSS MUTATED | 4 | 0 | 3 | 4 | 5 | 0 | 0 |
8P LOSS WILD-TYPE | 15 | 18 | 10 | 14 | 6 | 6 | 5 |
P value = 0.00058 (Fisher's exact test), Q value = 0.0066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
8P LOSS MUTATED | 1 | 1 | 0 | 2 | 0 | 0 | 0 | 5 |
8P LOSS WILD-TYPE | 7 | 6 | 7 | 1 | 4 | 4 | 6 | 1 |
P value = 0.023 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
8P LOSS MUTATED | 2 | 2 | 1 | 5 | 3 |
8P LOSS WILD-TYPE | 14 | 25 | 10 | 15 | 1 |
P value = 0.0108 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
8P LOSS MUTATED | 0 | 1 | 4 | 4 | 4 | 0 |
8P LOSS WILD-TYPE | 6 | 23 | 7 | 10 | 7 | 11 |
P value = 0.0135 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
8Q LOSS MUTATED | 1 | 0 | 3 | 3 | 5 | 0 | 0 |
8Q LOSS WILD-TYPE | 18 | 18 | 10 | 15 | 6 | 6 | 5 |
P value = 0.0357 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 8 | 7 | 7 | 3 | 4 | 4 | 6 | 6 |
8Q LOSS MUTATED | 1 | 1 | 0 | 2 | 0 | 0 | 0 | 3 |
8Q LOSS WILD-TYPE | 7 | 6 | 7 | 1 | 4 | 4 | 6 | 3 |
P value = 0.0246 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
8Q LOSS MUTATED | 3 | 2 | 5 | 0 |
8Q LOSS WILD-TYPE | 21 | 12 | 11 | 23 |
P value = 0.0352 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
8Q LOSS MUTATED | 1 | 1 | 1 | 5 | 2 |
8Q LOSS WILD-TYPE | 15 | 26 | 10 | 15 | 2 |
P value = 0.0265 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
8Q LOSS MUTATED | 2 | 4 | 4 | 0 |
8Q LOSS WILD-TYPE | 14 | 15 | 12 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
9P LOSS MUTATED | 8 | 0 | 0 | 10 | 1 | 0 | 1 |
9P LOSS WILD-TYPE | 11 | 18 | 13 | 8 | 10 | 6 | 4 |
P value = 0.0119 (Fisher's exact test), Q value = 0.068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
9P LOSS MUTATED | 7 | 5 | 4 | 3 | 0 | 0 | 0 |
9P LOSS WILD-TYPE | 9 | 9 | 4 | 14 | 9 | 12 | 2 |
P value = 8e-05 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
9P LOSS MUTATED | 14 | 1 | 3 | 1 |
9P LOSS WILD-TYPE | 10 | 13 | 13 | 22 |
P value = 0.00097 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
9P LOSS MUTATED | 12 | 4 | 2 | 1 |
9P LOSS WILD-TYPE | 11 | 19 | 5 | 23 |
P value = 0.0402 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 29 | 24 | 25 |
9P LOSS MUTATED | 8 | 9 | 2 |
9P LOSS WILD-TYPE | 21 | 15 | 23 |
P value = 0.00308 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
9P LOSS MUTATED | 9 | 5 | 1 | 3 |
9P LOSS WILD-TYPE | 7 | 14 | 15 | 23 |
P value = 0.038 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
9Q LOSS MUTATED | 5 | 0 | 0 | 5 | 1 | 0 | 1 |
9Q LOSS WILD-TYPE | 14 | 18 | 13 | 13 | 10 | 6 | 4 |
P value = 0.00125 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
11P LOSS MUTATED | 2 | 1 | 3 | 5 | 6 | 5 | 1 |
11P LOSS WILD-TYPE | 17 | 17 | 10 | 13 | 5 | 1 | 4 |
P value = 0.00172 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
11Q LOSS MUTATED | 3 | 1 | 3 | 3 | 6 | 5 | 1 |
11Q LOSS WILD-TYPE | 16 | 17 | 10 | 15 | 5 | 1 | 4 |
P value = 0.0113 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
11Q LOSS MUTATED | 1 | 2 | 4 | 9 | 3 | 1 | 0 |
11Q LOSS WILD-TYPE | 15 | 12 | 4 | 8 | 6 | 11 | 2 |
P value = 0.0378 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
12P LOSS MUTATED | 2 | 1 | 2 | 0 |
12P LOSS WILD-TYPE | 21 | 22 | 5 | 24 |
P value = 0.0103 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
12Q LOSS MUTATED | 2 | 0 | 2 | 0 |
12Q LOSS WILD-TYPE | 21 | 23 | 5 | 24 |
P value = 0.0198 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
12Q LOSS MUTATED | 0 | 0 | 1 | 0 | 3 | 0 |
12Q LOSS WILD-TYPE | 6 | 24 | 10 | 14 | 8 | 11 |
P value = 0.00127 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
13Q LOSS MUTATED | 6 | 2 | 5 | 10 | 9 | 5 | 2 |
13Q LOSS WILD-TYPE | 13 | 16 | 8 | 8 | 2 | 1 | 3 |
P value = 0.00077 (Fisher's exact test), Q value = 0.0082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
14Q LOSS MUTATED | 4 | 1 | 0 | 6 | 2 | 5 | 0 |
14Q LOSS WILD-TYPE | 15 | 17 | 13 | 12 | 9 | 1 | 5 |
P value = 0.0153 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
14Q LOSS MUTATED | 7 | 0 | 1 | 8 |
14Q LOSS WILD-TYPE | 17 | 14 | 15 | 15 |
P value = 0.0461 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
14Q LOSS MUTATED | 5 | 1 | 3 | 7 |
14Q LOSS WILD-TYPE | 18 | 22 | 4 | 17 |
P value = 0.00074 (Fisher's exact test), Q value = 0.008
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
15Q LOSS MUTATED | 2 | 1 | 2 | 8 | 3 | 5 | 0 |
15Q LOSS WILD-TYPE | 17 | 17 | 11 | 10 | 8 | 1 | 5 |
P value = 0.0404 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
15Q LOSS MUTATED | 0 | 7 | 2 | 8 | 1 |
15Q LOSS WILD-TYPE | 16 | 20 | 9 | 12 | 3 |
P value = 0.0484 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
15Q LOSS MUTATED | 0 | 5 | 0 | 7 | 3 | 3 |
15Q LOSS WILD-TYPE | 6 | 19 | 11 | 7 | 8 | 8 |
P value = 0.0397 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
16P LOSS MUTATED | 4 | 0 | 0 | 0 |
16P LOSS WILD-TYPE | 20 | 14 | 16 | 23 |
P value = 0.00024 (Fisher's exact test), Q value = 0.0035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
17P LOSS MUTATED | 5 | 1 | 4 | 11 | 9 | 1 | 2 |
17P LOSS WILD-TYPE | 14 | 17 | 9 | 7 | 2 | 5 | 3 |
P value = 0.00256 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
17P LOSS MUTATED | 10 | 5 | 3 | 10 | 0 | 1 | 0 |
17P LOSS WILD-TYPE | 6 | 9 | 5 | 7 | 9 | 11 | 2 |
P value = 0.004 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
17P LOSS MUTATED | 15 | 4 | 7 | 3 |
17P LOSS WILD-TYPE | 9 | 10 | 9 | 20 |
P value = 0.0152 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
17P LOSS MUTATED | 12 | 11 | 3 | 3 |
17P LOSS WILD-TYPE | 11 | 12 | 4 | 21 |
P value = 0.00094 (Fisher's exact test), Q value = 0.0099
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
17P LOSS MUTATED | 5 | 8 | 0 | 14 | 2 |
17P LOSS WILD-TYPE | 11 | 19 | 11 | 6 | 2 |
P value = 0.0318 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 19 | 16 | 26 |
17P LOSS MUTATED | 8 | 10 | 6 | 4 |
17P LOSS WILD-TYPE | 8 | 9 | 10 | 22 |
P value = 5e-04 (Fisher's exact test), Q value = 0.0061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
17P LOSS MUTATED | 1 | 6 | 3 | 12 | 5 | 1 |
17P LOSS WILD-TYPE | 5 | 18 | 8 | 2 | 6 | 10 |
P value = 0.0116 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
17Q LOSS MUTATED | 4 | 1 | 4 | 7 | 7 | 0 | 2 |
17Q LOSS WILD-TYPE | 15 | 17 | 9 | 11 | 4 | 6 | 3 |
P value = 0.0122 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
17Q LOSS MUTATED | 6 | 4 | 4 | 10 | 0 | 1 | 0 |
17Q LOSS WILD-TYPE | 10 | 10 | 4 | 7 | 9 | 11 | 2 |
P value = 0.047 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
17Q LOSS MUTATED | 9 | 11 | 2 | 3 |
17Q LOSS WILD-TYPE | 14 | 12 | 5 | 21 |
P value = 0.00895 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 16 | 27 | 11 | 20 | 4 |
17Q LOSS MUTATED | 6 | 6 | 0 | 11 | 2 |
17Q LOSS WILD-TYPE | 10 | 21 | 11 | 9 | 2 |
P value = 0.0454 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
17Q LOSS MUTATED | 1 | 5 | 4 | 9 | 4 | 1 |
17Q LOSS WILD-TYPE | 5 | 19 | 7 | 5 | 7 | 10 |
P value = 0.00387 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
18P LOSS MUTATED | 7 | 2 | 6 | 9 | 6 | 6 | 1 |
18P LOSS WILD-TYPE | 12 | 16 | 7 | 9 | 5 | 0 | 4 |
P value = 0.0039 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
18Q LOSS MUTATED | 6 | 2 | 6 | 9 | 5 | 6 | 1 |
18Q LOSS WILD-TYPE | 13 | 16 | 7 | 9 | 6 | 0 | 4 |
P value = 0.0138 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
19P LOSS MUTATED | 1 | 0 | 2 | 0 |
19P LOSS WILD-TYPE | 22 | 23 | 5 | 24 |
P value = 0.0294 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
19P LOSS MUTATED | 1 | 0 | 0 | 0 | 2 | 0 |
19P LOSS WILD-TYPE | 5 | 24 | 11 | 14 | 9 | 11 |
P value = 0.0445 (Fisher's exact test), Q value = 0.16
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
19Q LOSS MUTATED | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
19Q LOSS WILD-TYPE | 15 | 18 | 13 | 18 | 11 | 6 | 5 |
P value = 0.0308 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 6 | 24 | 11 | 14 | 11 | 11 |
19Q LOSS MUTATED | 1 | 0 | 0 | 0 | 2 | 0 |
19Q LOSS WILD-TYPE | 5 | 24 | 11 | 14 | 9 | 11 |
P value = 0.0169 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
21Q LOSS MUTATED | 4 | 1 | 0 | 4 | 2 | 4 | 0 |
21Q LOSS WILD-TYPE | 15 | 17 | 13 | 14 | 9 | 2 | 5 |
P value = 0.00453 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
22Q LOSS MUTATED | 10 | 4 | 5 | 13 | 8 | 6 | 2 |
22Q LOSS WILD-TYPE | 9 | 14 | 8 | 5 | 3 | 0 | 3 |
P value = 0.00068 (Fisher's exact test), Q value = 0.0075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
XP LOSS MUTATED | 8 | 0 | 0 | 2 | 5 | 1 | 0 |
XP LOSS WILD-TYPE | 11 | 18 | 13 | 16 | 6 | 5 | 5 |
P value = 0.0373 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 19 | 18 | 13 | 18 | 11 | 6 | 5 |
XQ LOSS MUTATED | 7 | 1 | 0 | 3 | 4 | 1 | 0 |
XQ LOSS WILD-TYPE | 12 | 17 | 13 | 15 | 7 | 5 | 5 |
P value = 0.0173 (Fisher's exact test), Q value = 0.084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 16 | 14 | 8 | 17 | 9 | 12 | 2 |
XQ LOSS MUTATED | 4 | 1 | 5 | 2 | 1 | 0 | 0 |
XQ LOSS WILD-TYPE | 12 | 13 | 3 | 15 | 8 | 12 | 2 |
P value = 0.0166 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 10 | 11 | 10 | 14 |
XQ LOSS MUTATED | 0 | 5 | 0 | 2 |
XQ LOSS WILD-TYPE | 10 | 6 | 10 | 12 |
P value = 0.0347 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 24 | 14 | 16 | 23 |
XQ LOSS MUTATED | 8 | 0 | 3 | 2 |
XQ LOSS WILD-TYPE | 16 | 14 | 13 | 21 |
P value = 0.0361 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 23 | 23 | 7 | 24 |
XQ LOSS MUTATED | 8 | 3 | 1 | 1 |
XQ LOSS WILD-TYPE | 15 | 20 | 6 | 23 |
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Copy number data file = broad_values_by_arm.txt from GISTIC pipeline
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Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/ACC-TP/22522856/transformed.cor.cli.txt
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Molecular subtypes file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/ACC-TP/22541000/ACC-TP.transferedmergedcluster.txt
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Number of patients = 90
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Number of significantly arm-level cnvs = 82
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Number of molecular subtypes = 10
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Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.