PARADIGM pathway analysis of mRNASeq expression data
Bladder Urothelial Carcinoma (Primary solid tumor)
15 January 2014  |  analyses__2014_01_15
Maintainer Information
Citation Information
Maintained by Dan DiCara (Broad Institute)
Cite as Broad Institute TCGA Genome Data Analysis Center (2014): PARADIGM pathway analysis of mRNASeq expression data. Broad Institute of MIT and Harvard. doi:10.7908/C16M359C
- Overview
+ Introduction
- Summary

There were 60 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
FOXM1 transcription factor network 73
Glypican 2 network 52
Aurora B signaling 52
Signaling events regulated by Ret tyrosine kinase 48
Calcineurin-regulated NFAT-dependent transcription in lymphocytes 43
Signaling events mediated by the Hedgehog family 39
Signaling mediated by p38-alpha and p38-beta 37
IL4-mediated signaling events 36
Nongenotropic Androgen signaling 36
IGF1 pathway 36
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data