PARADIGM pathway analysis of mRNA expression data
Lung Squamous Cell Carcinoma (Primary solid tumor)
23 May 2013  |  analyses__2013_05_23
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2013): PARADIGM pathway analysis of mRNA expression data. Broad Institute of MIT and Harvard. doi:10.7908/C1X34VH2
- Overview
+ Introduction
- Summary

There were 61 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
TCGA08_retinoblastoma 53
HIF-1-alpha transcription factor network 34
IL23-mediated signaling events 28
Wnt signaling 26
TCGA08_p53 22
IL4-mediated signaling events 21
Noncanonical Wnt signaling pathway 20
Endothelins 20
Signaling mediated by p38-alpha and p38-beta 20
Syndecan-1-mediated signaling events 19
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data