PARADIGM pathway analysis of mRNA expression and copy number data
Glioma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNA expression and copy number data. Broad Institute of MIT and Harvard. doi:10.7908/C1F76BZG
- Overview
+ Introduction
- Summary

There were 82 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
Glypican 2 network 228
Calcineurin-regulated NFAT-dependent transcription in lymphocytes 115
PLK2 and PLK4 events 107
Effects of Botulinum toxin 91
TCGA08_rtk_signaling 88
Ceramide signaling pathway 85
S1P5 pathway 83
TCGA08_p53 81
Arf6 signaling events 76
Signaling events regulated by Ret tyrosine kinase 71
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data