PARADIGM pathway analysis of mRNASeq expression data
Lung Adenocarcinoma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNASeq expression data. Broad Institute of MIT and Harvard. doi:10.7908/C16Q1WP8
- Overview
+ Introduction
- Summary

There were 40 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
Glypican 2 network 193
Angiopoietin receptor Tie2-mediated signaling 155
FOXM1 transcription factor network 129
Aurora B signaling 120
Signaling events mediated by the Hedgehog family 106
Aurora C signaling 77
Endothelins 72
HIF-1-alpha transcription factor network 70
Visual signal transduction: Cones 68
PLK1 signaling events 66
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data