PARADIGM pathway analysis of mRNASeq expression data
Ovarian Serous Cystadenocarcinoma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNASeq expression data. Broad Institute of MIT and Harvard. doi:10.7908/C1639P6B
- Overview
+ Introduction
- Summary

There were 45 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
TCGA08_retinoblastoma 57
IL4-mediated signaling events 46
IL23-mediated signaling events 45
FOXA2 and FOXA3 transcription factor networks 42
Wnt signaling 40
Signaling events regulated by Ret tyrosine kinase 39
Syndecan-1-mediated signaling events 36
TCR signaling in naïve CD8+ T cells 36
Endothelins 31
Glypican 2 network 31
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data