PARADIGM pathway analysis of mRNASeq expression data
Pheochromocytoma and Paraganglioma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNASeq expression data. Broad Institute of MIT and Harvard. doi:10.7908/C16M368B
- Overview
+ Introduction
- Summary

There were 39 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
PDGFR-alpha signaling pathway 63
Noncanonical Wnt signaling pathway 52
Wnt signaling 51
IL23-mediated signaling events 41
Ras signaling in the CD4+ TCR pathway 39
Thromboxane A2 receptor signaling 33
EGFR-dependent Endothelin signaling events 30
IGF1 pathway 30
Insulin Pathway 29
RXR and RAR heterodimerization with other nuclear receptor 28
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data